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* ** PLEASE DON'T EDIT THIS TABLE DIRECTLY. Use the edit table link under the table. ** | * ** PLEASE DON'T EDIT THIS TABLE DIRECTLY. Use the edit table link under the table. ** | ||
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{| | {| id="G49aeebed94934" class=" tableEdit New_Quickview_Table" | ||
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!align=left {{table_heading_style}} |Standard Name | !align=left {{table_heading_style}} |Standard Name | ||
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''marA'' | ''marA'' | ||
|- | |- | ||
!align=left {{table_heading_style}} |Gene Synonym(s) | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK1524, b1531, JW5249, cfxB, norB, soxQ, inaR, nfxC''<ref name='LIB:Riley_2006'/> | ''ECK1524, b1531, JW5249, cfxB, norB, soxQ, inaR, nfxC''<ref name='LIB:Riley_2006'/>, nfxC'' | ||
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!align=left {{table_heading_style}} |Product Desc. | !align=left {{table_heading_style}} |Product Desc. | ||
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!align=left {{table_heading_style}} |Product Synonyms(s) | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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DNA-binding transcriptional dual activator of multiple antibiotic resistance<ref name='LIB:Riley_2006'/>, B1531<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CfxB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, InaR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, NorB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, SoxQ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, NfxC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MarA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ''DNA-binding transcriptional dual activator of multiple antibiotic resistance<ref name='LIB:Riley_2006'/>, B1531<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CfxB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, InaR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, NorB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, SoxQ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, NfxC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MarA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , cfxB, ECK1524, inaR, JW5249, nfxC, norB, soxQ, b1531'' | ||
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!align=left {{table_heading_style}} |Function from GO | !align=left {{table_heading_style}} |Function from GO | ||
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<GO_nr /> | |||
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!align=left {{table_heading_style}} |Knock-Out Phenotype | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Quick Links | !align=left {{table_heading_style}} |Quick Links | ||
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[http://ecoliwiki.net/tools/display_dna.php?gene=marA&loc=MG1655 | [[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=marA&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11434]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120001398&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=marA&loc=MG1655%3A1617598..1617981,W3110%3A1621288..1621671,DH10B%3A1707223..1707606,REL606%3A1587340..1587723,BW2952%3A1509657..1510040]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1509657&end=1510040&gene=marA&aa=mtmsrrntdaitihsildwiednlesplslekvsersgyskwhlqrmfkketghslgqyirsrkmteiaqklkesnepilylaerygfesqqtltrtfknyfdvpphkyrmtnmqgesrflhplnhyns]] [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=marA+AND+escherichia+coli]] [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=marA]] | ||
|- class="tableEdit_footer" | |- class="tableEdit_footer" | ||
Latest revision as of 21:48, 27 May 2013
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
| Standard Name |
marA |
|---|---|
| Gene Synonym(s) |
ECK1524, b1531, JW5249, cfxB, norB, soxQ, inaR, nfxC[1], nfxC |
| Product Desc. |
MarA transcriptional activator[2]; MarA transcriptional dual regulator[3] Transcriptional activator for multiple antibiotic resistance; AraC family; resistance to tetracycline, chloramphenicol[4] |
| Product Synonyms(s) |
DNA-binding transcriptional dual activator of multiple antibiotic resistance[1], B1531[2][1], CfxB[2][1], InaR[2][1], NorB[2][1], SoxQ[2][1], NfxC[2][1], MarA[2][1] , cfxB, ECK1524, inaR, JW5249, nfxC, norB, soxQ, b1531 |
| Function from GO |
<GO_nr /> |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links |
|
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
Martin (2002) provide some evidence in support of the this alternative ATG start: native protein is slightly smaller than the engineered protein by Western blot. The spacing to the GAGG RBS is bad for the first ATG and excellent for the second ATG. MarA is unstable.[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 1.7 1.8 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 2.8 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.