tufB:Quickview: Difference between revisions

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Quickview

Standard Name	tufB
Gene Synonym(s)	ECK3971, b3980, JW3943, kirT, pulT^[1], pulT
Product Desc.	elongation factor Tu^[2]^[3] EF-Tu, Elongation Factor-Translation, unstable; GTP-dependent binding of aa-tRNA to the A-site of ribosomes; has intrinsic GTPase activity when bound to kirromycin^[4]
Product Synonyms(s)	B3980^[2], PulT^[2], KirT^[2], TufB^[2], EF-Tu^[2] , ECK3971, JW3943, kirT, pulT, b3980
Function from GO	<GO_nr />
Knock-Out Phenotype
Regulation/Expression	transcription unit(s): tufB^[2], thrU-tyrU-glyT-thrT^[2], thrU
Regulation/Activity
Quick Links
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Notes

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mgiglio@SOM.UMARYLAND.EDU

tufB encodes an essential function, with duplicate gene tufA, such that tufA or tufB can be deleted, but the double mutant is inviable.^[4]

References

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↑ Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
↑ ^2.0 ^2.1 ^2.2 ^2.3 ^2.4 ^2.5 ^2.6 ^2.7 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
↑ ^4.0 ^4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.

[LIB:Riley_2006-1] Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)

[LIB:EcoCyc10.6-2] 2.0 ^2.1 ^2.2 ^2.3 ^2.4 ^2.5 ^2.6 ^2.7 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7

[LIB:EcoCyc11.1-3] EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7

[LIB:EcoGene-4] 4.0 ^4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.

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[2]

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@@ Line 23: / Line 23: @@
 *   ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **
 *
-****************************************************************************************** -->{{Quickview_table_help}}
+****************************************************************************************** -->
-{|  id="S49b027770a8d4"  class=" tableEdit New_Quickview_Table"
+{|   id="S49b027770a8d4"  class=" tableEdit New_Quickview_Table"
 |-
-!align=left  |Standard Name
+!align=left {{table_heading_style}} |Standard Name
 ||
 ''tufB''
 |-
-!align=left  |Gene Synonym(s)
+!align=left {{table_heading_style}} |Gene Synonym(s)
 ||
-''ECK3971, b3980, JW3943, kirT, pulT''<ref name='LIB:Riley_2006'/>
+''ECK3971, b3980, JW3943, kirT, pulT''<ref name='LIB:Riley_2006'/>, pulT''
 |-
-!align=left  |Product Desc.
+!align=left {{table_heading_style}} |Product Desc.
 ||
 elongation factor Tu<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
@@ Line 41: / Line 41: @@
 EF-Tu, Elongation Factor-Translation, unstable; GTP-dependent binding of aa-tRNA to the A-site of ribosomes; has intrinsic GTPase activity when bound to kirromycin<ref name='LIB:EcoGene'/>
 |-
-!align=left  |Product Synonyms(s)
+!align=left {{table_heading_style}} |Product Synonyms(s)
 ||
-B3980<ref name='LIB:EcoCyc10.6'/>, PulT<ref name='LIB:EcoCyc10.6'/>, KirT<ref name='LIB:EcoCyc10.6'/>, TufB<ref name='LIB:EcoCyc10.6'/>, EF-Tu<ref name='LIB:EcoCyc10.6'/>
+''B3980<ref name='LIB:EcoCyc10.6'/>, PulT<ref name='LIB:EcoCyc10.6'/>, KirT<ref name='LIB:EcoCyc10.6'/>, TufB<ref name='LIB:EcoCyc10.6'/>, EF-Tu<ref name='LIB:EcoCyc10.6'/> , ECK3971, JW3943, kirT, pulT, b3980''
 |-
-!align=left  |Knock-Out Phenotype
+!align=left {{table_heading_style}} |Function from GO
+||
+<GO_nr />
+|-
+!align=left {{table_heading_style}} |Knock-Out Phenotype
 ||
 |-
-!align=left  |Regulation/Expression
+!align=left {{table_heading_style}} |Regulation/Expression
 ||
 transcription unit(s): [[:Category:Txn_unit:tufB|tufB]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:thrU-tyrU-glyT-thrT|thrU-tyrU-glyT-thrT]]<ref name='LIB:EcoCyc10.6'/>, thrU
 |-
-!align=left  |Regulation/Activity
+!align=left {{table_heading_style}} |Regulation/Activity
 ||
+|-
+!align=left {{table_heading_style}} |Quick Links
+||
+[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=tufB&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11037]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120001026&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=tufB&loc=MG1655%3A4173967..4175151,W3110%3A3460737..3459553,REL606%3A4155555..4156739,DH10B%3A4273663..4274847,BW2952%3A4063647..4064831]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4063647&end=4064831&gene=tufB&aa=mskekfertkphvnvgtighvdhgkttltaaittvlaktyggaarafdqidnapeekargitintshveydtptrhyahvdcpghadyvknmitgaaqmdgailvvaatdgpmpqtrehillgrqvgvpyiivflnkcdmvddeellelvemevrellsqydfpgddtpivrgsalkalegdaeweakilelagfldsyipeperaidkpfllpiedvfsisgrgtvvtgrvergiikvgeeveivgiketqkstctgvemfrklldegragenvgvllrgikreeiergqvlakpgtikphtkfesevyilskdeggrhtpffkgyrpqfyfrttdvtgtielpegvemvmpgdnikmvvtlihpiamddglrfaireggrtvgagvvakvls]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=tufB+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=tufB]]&nbsp;&nbsp;
 |- class="tableEdit_footer"

tufB:Quickview: Difference between revisions

Latest revision as of 21:45, 27 May 2013

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References

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