rsgA:Quickview: Difference between revisions

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{{Tab On|Quickview|rsgA}}{{Tab|Gene|rsgA}}{{Tab|Gene Product(s)|rsgA}}{{Tab|Expression|rsgA}}{{Tab|Evolution|rsgA}}{{Tab|On One Page|rsgA}}{{TabsBottom}}
{{Tab On|Quickview|rsgA}}{{Tab|Gene|rsgA}}{{Tab|Gene Product(s)|rsgA}}{{Tab|Expression|rsgA}}{{Tab|Evolution|rsgA}}{{Tab|On One Page|rsgA}}{{TabsBottom}}
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[rsgA:Gene|''rsgA]]'' (synonyms: ''ECK4157, b4161, JW4122, yjeQ'')<ref name='LIB:Riley_2006'/>
''rsgA''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[rsgA:Gene_Product(s)|RsgA product]]<ref name='LIB:Riley_2006'/>: ribosome small subunit-dependent GTPase A product, B4161 product, YjeQ product
''ECK4157, b4161, JW4122, yjeQ''<ref name='LIB:Riley_2006'/>, engC, yjeQ''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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ribosome small subunit-dependent GTPase A<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
ribosome small subunit-dependent GTPase A<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


Ribosome-stimulated GTPase, function unknown; low adundance protein; putative RNA binding protein<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''ribosome small subunit-dependent GTPase A<ref name='LIB:Riley_2006'/>, B4161<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YjeQ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RsgA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK4157, engC, JW4122, yjeQ, b4161''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:rsgA|rsgA]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:rsgA|rsgA]]<ref name='LIB:EcoCyc10.6'/>  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=rsgA&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G7841]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120004337&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=rsgA&loc=MG1655%3A4389532..4388480,W3110%3A4396189..4395137,DH10B%3A4489894..4488842,REL606%3A4368612..4369664,BW2952%3A4327215..4328267]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4327215&end=4328267&gene=rsgA&aa=mnanhqrrlktskekpdyddnlfgepdegivisrfgmhadvesadgdvhrcnirrtirslvtgdrvvwrpgkpaaegvnvkgiveavhertsvltrpdfydgvkpiaanidqivivsailpelslniidrylvacetlqiepiivlnkidllddegmafvneqmdiyrnigyrvlmvsshtqdglkpleealtgrisifagqsgvgkssllnallglqkeiltndisdnsglgqhtttaarlyhfphggdvidspgvrefglwhlepeqitqgfvefhdylglckyrdckhdtdpgcaireaveegkiaetrfenyhrilesmaqvktrknfsdtdd]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=rsgA+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=rsgA]]&nbsp;&nbsp;
 
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==Notes==
===Notes===
{{BacktoTop}}
 
rsgA(yjeQ) has been reported to be an essential gene, but deletion mutants have also been reported to grow slowly. RsgA:ribosomes is 1:200 in vivo. Guanine nucleotide-dependent 30S subunit binding greatly stimulates GTPase activity. OtherPDB (S.typhimurium):2RCN. RsgA may be involved in ribosome biogenesis.<ref name='LIB:EcoGene'/>
 




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==References==
==References==
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<references/>
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Latest revision as of 21:46, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

rsgA

Gene Synonym(s)

ECK4157, b4161, JW4122, yjeQ[1], engC, yjeQ

Product Desc.

ribosome small subunit-dependent GTPase A[2][3]

Ribosome-stimulated GTPase, function unknown; low adundance protein; putative RNA binding protein[4]

Product Synonyms(s)

ribosome small subunit-dependent GTPase A[1], B4161[2][1], YjeQ[2][1], RsgA[2][1] , ECK4157, engC, JW4122, yjeQ, b4161

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): rsgA[2]

Regulation/Activity
Quick Links



        

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Notes

[back to top]


rsgA(yjeQ) has been reported to be an essential gene, but deletion mutants have also been reported to grow slowly. RsgA:ribosomes is 1:200 in vivo. Guanine nucleotide-dependent 30S subunit binding greatly stimulates GTPase activity. OtherPDB (S.typhimurium):2RCN. RsgA may be involved in ribosome biogenesis.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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