Phage lambda N:Gene Product(s): Difference between revisions

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|{{Sub}}[[#Localization |Localization]]
|{{Sub}}[[#Localization |Localization]]
|{{Sub}}[[#Sequence|Sequence]]
|{{Sub}}[[#Sequence|Sequence]]
|{{Sub}}[[#Domains/Motifs/Modification Sites|Domains]]
|{{Sub}}[[#Structure|Structure]]
|{{Sub}}[[#Structure|Structure]]
|{{Sub}}[[#Gene Product Resources|Resources]]
|{{Sub}}[[#Gene Product Resources|Resources]]
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|-
|-
!{{table heading style}} |Standard name
!align=left {{table heading style}} |Standard name
|
||
N  
N
|-
|-
!{{table heading style}} |Synonyms
!align=left {{table heading style}} |Synonyms
|
||
N, lambdap49  
N, lambdap49
|-
|-
!{{table heading style}} |Product description
!align=left {{table heading style}} |Product description
|
||
 
|-
|-
!{{table heading style}} |EC number (for enzymes)
!align=left {{table heading style}} |EC number (for enzymes)
|
||
 


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===Notes===
===Notes===
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!Qualifier!!GO ID!!GO term name!!Reference(s)!!Evidence Code!!with/from!!Aspect!!Notes!!Status
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|
 
|
GO:0031564
|
transcription antitermination
|
PMID:4915096
|
IMP: Inferred from Mutant Phenotype
|
 
|
P
|
 
|
complete
 
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<span id="Interactions"></span><big>'''Interactions'''</big>
<span id="Interactions"></span><big>'''Interactions'''</big>
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!|Partner Type!!Partner!!Notes!!References!!Evidence
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|
Protein
|
beta subunit of RNA polymerase
|
PMID:5040359
|
|
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{{Product_interactions_help}}
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===Notes===
===Notes===
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!align=left {{table heading style}} |Name
||
 
|-
!align=left {{table heading style}} |Sequence
||
<pre>MDAQTRRRER RAEKQAQWKA ANPLLVGVSA KPVNLPILSL NRKPKSRVES ALNPIDLTVL
AEYHKQIESN LQRIERKNQR TWYSKPGERG ITCSGRQKIK GKSIPLI</pre>
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!{{table heading style}} |Sequence
!align=left {{table heading style}} |Length
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<pre>MDAQTRRRER RAEKQAQWKA ANPLLVGVSA KPVNLPILSL NRKPKSRVES ALNPIDLTVL<br/> AEYHKQIESN LQRIERKNQR TWYSKPGERG ITCSGRQKIK GKSIPLI</pre>
107
|-
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!{{table heading style}} |Mol. Wt
!align=left {{table heading style}} |Mol. Wt
|
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12.255 kDa
|-
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!{{table heading style}} |pI
!align=left {{table heading style}} |pI
|
||
 
11.3 (calculated)
|-
|-
!{{table heading style}} |Extinction coefficient
!align=left {{table heading style}} |Extinction coefficient
|
||
13,980 - 14,105 (calc based on 2 Y, 2 W, and 1 C residues)


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<big>'''Domains/Motifs/Modification Sites'''</big>
 
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<td>
<!-- motifs column 2-->
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<span id="Structure"></span><big>'''Structure'''</big>
<table><tr valign='top'><td>
<span id='Structure'></span><big>'''Structure'''</big><br />
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!Structure Type!!Organism!!Accession!!Residues covered!!Notes
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||
<beststructure>
gene=Phage_lambda_N
taxon=10710
</beststructure>
|-
!align=left {{table heading style}} |Models
||
View models at:
* [http://www.proteinmodelportal.org/query/uniprot/P03045 Protein Model Portal]
* [http://bioinf.cs.ucl.ac.uk/psipred/ PSI-PRED]
* [http://spock.genes.nig.ac.jp/~genome/search.html Genomes TO Protein] (GTOP)
 
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==== Structure figures ====
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
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===Notes===
===Notes===


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===Notes===
===Notes===
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{{BacktoTop}}
{{BacktoTop}}
{{RefHelp}}
{{RefHelp}}
<references/>
<references />
__NOTOC__
__NOTOC__
</noinclude>
===Categories===
===Categories===
{{BacktoTop}}
{{BacktoTop}}

Latest revision as of 20:19, 17 February 2015

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Standard name

N

Synonyms

N, lambdap49

Product description
EC number (for enzymes)


edit table


Notes

Function

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Gene Ontology See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0031564

transcription antitermination

PMID:4915096[1]

IMP: Inferred from Mutant Phenotype

P

complete

edit table


Interactions <protect> See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence

Protein

beta subunit of RNA polymerase

PMID:5040359[2]


edit table


</protect>

Notes

Localization

See Help:Product_localization for how to add or edit information in this section of EcoliWiki.

Compartment Description Evidence Reference/Source Notes
edit table


Notes

Structure and Physical Properties

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Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence 
MDAQTRRRER RAEKQAQWKA ANPLLVGVSA KPVNLPILSL NRKPKSRVES ALNPIDLTVL
AEYHKQIESN LQRIERKNQR TWYSKPGERG ITCSGRQKIK GKSIPLI
Length

107

Mol. Wt

12.255 kDa

pI

11.3 (calculated)

Extinction coefficient

13,980 - 14,105 (calc based on 2 Y, 2 W, and 1 C residues)

edit table


Domains/Motifs/Modification Sites

See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Type Residues Description Notes References
edit table

<motif_map/>

Structure
See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures

<beststructure> gene=Phage_lambda_N taxon=10710 </beststructure>

Models

View models at:

edit table

Structure figures

Notes

Gene Product Resources

[back to top]


See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes
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Notes

Links

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Name URL Comments
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References

[back to top]


See Help:References for how to manage references in EcoliWiki.

  1. ↑ Luzzati, D (1970) Regulation of lambda exonuclease synthesis: role of the N gene product and lambda repressor. J. Mol. Biol. 49 515-9 PubMed
  2. ↑ Ghysen, A & Pironio, M (1972) Relationship between the N function of bacteriophage lambda and host RNA polymerase. J. Mol. Biol. 65 259-72 PubMed

Categories

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Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=Phage_lambda_N:Gene_Product(s)&oldid=1492038"