pptA:Quickview: Difference between revisions

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{|   id="V49b0208898643" class=" tableEdit New_Quickview_Table"


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!align=left {{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[pptA:Gene|''pptA]]'' (synonyms: ''ydcE, ECK1455, b1461, JW1456'')<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
''pptA''
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!align=left {{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[pptA:Gene_Product(s)|YdcE product]]<ref name='LIB:Riley_2006'/>: 4-oxalocrotonate tautomerase product, PptA product, B1461 product
''ydcE, ECK1455, b1461, JW1456''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>, JW1456''
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!align=left {{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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probable 4-oxalocrotonate tautomerase (4-OT) monomer<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
probable 4-oxalocrotonate tautomerase (4-OT)<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;


Component of [[:Category:Complex:probable 4-oxalocrotonate tautomerase (4-OT)|probable 4-oxalocrotonate tautomerase (4-OT)]]<ref name='LIB:EcoCyc11.1'/>
Component of [[:Category:Complex:probable 4-oxalocrotonate tautomerase (4-OT)|probable 4-oxalocrotonate tautomerase (4-OT)]]<ref name='LIB:EcoCyc11.1'/>


Phenylpyruvate tautomerase; other substrates are (p-hydroxyphenyl)pyruvate and 2-hydroxy-2,4-pentadienoate; homodimeric<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Product Synonyms(s)
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''4-oxalocrotonate tautomerase<ref name='LIB:Riley_2006'/>, PptA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YdcE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, B1461<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK1455, JW1456, ydcE, b1461''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:ydcE|ydcE]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:ydcE|ydcE]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=pptA&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11761]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120001697&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=pptA&loc=MG1655%3A1531076..1531309,W3110%3A1534766..1534999,REL606%3A1507202..1507429,DH10B%3A1621671..1621904,BW2952%3A1423135..1423368]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1423135&end=1423368&gene=pptA&aa=mphidikcfpreldeqqkaalaaditdviirhlnskdssisialqqiqpeswqaiwdaeiapqmealikkpgysmna]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=pptA+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=pptA]]&nbsp;&nbsp;


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{{Quickview_table_help}}
{{Quickview_table_help}}
<protect><!--Quickview_notes--></protect>
<protect><!--Quickview_notes--></protect>
===Notes===
===Notes===
{{BacktoTop}}
{{BacktoTop}}
Cleavage of PptA fMet was confirmed by mass spec: obs. MW = 8540.  N-terminal proline is presumed to be the catalytic base residue of the active site.<ref name='LIB:EcoGene'/>




Latest revision as of 21:54, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

pptA

Gene Synonym(s)

ydcE, ECK1455, b1461, JW1456[1][2], JW1456

Product Desc.

probable 4-oxalocrotonate tautomerase (4-OT)[2][3];

Component of probable 4-oxalocrotonate tautomerase (4-OT)[3]

Phenylpyruvate tautomerase; other substrates are (p-hydroxyphenyl)pyruvate and 2-hydroxy-2,4-pentadienoate; homodimeric[4]

Product Synonyms(s)

4-oxalocrotonate tautomerase[1], PptA[2][1], YdcE[2][1], B1461[2][1] , ECK1455, JW1456, ydcE, b1461

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): ydcE[2]

Regulation/Activity
Quick Links



        

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


Cleavage of PptA fMet was confirmed by mass spec: obs. MW = 8540. N-terminal proline is presumed to be the catalytic base residue of the active site.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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