accC:Quickview: Difference between revisions

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{|   id="G49aedeff31444"  class=" tableEdit New_Quickview_Table" 
 
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[accC:Gene|''accC]]'' (synonyms: ''ECK3243, b3256, JW3224'')<ref name='LIB:Riley_2006'/>
''accC''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[accC:Gene_Product(s)|AccC product]]<ref name='LIB:Riley_2006'/>: acetyl-CoA carboxylase, biotin carboxylase subunit product, B3256 product
''ECK3243, b3256, JW3224''<ref name='LIB:Riley_2006'/>, fabG, JW3224''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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AccC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
AccC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;


Component of [[:Category:Complex:biotin carboxylase|biotin carboxylase]]<ref name='LIB:EcoCyc10.6'/>,[[:Category:Complex:acetyl CoA carboxylase|acetyl CoA carboxylase]]<ref name='LIB:EcoCyc10.6'/>
Component of [[:Category:Complex:biotin carboxylase|biotin carboxylase]]<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; [[:Category:Complex:acetyl CoA carboxylase|acetyl CoA carboxylase]]<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


Acetyl-CoA carboxylase, biotin carboxylase (BC) subunit<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''acetyl-CoA carboxylase, biotin carboxylase subunit<ref name='LIB:Riley_2006'/>, B3256<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AccC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK3243, fabG, JW3224, b3256''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:accBC|accBC]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:accBC|accBC]]<ref name='LIB:EcoCyc10.6'/>  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=accC&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10276]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000270&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=accC&loc=BW2952%3A3291087..3292436,MG1655%3A3403939..3405288,W3110%3A3405772..3407121,DH10B%3A3501684..3503033,REL606%3A3333808..3335157]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3333808&end=3335157&gene=accC&aa=mldkivianrgeialrilrackelgiktvavhssadrdlkhvlladetvcigpapsvksylnipaiisaaeitgavaihpgygflsenanfaeqversgfifigpkaetirlmgdkvsaiaamkkagvpcvpgsdgplgddmdknraiakrigypviikasgggggrgmrvvrgdaelaqsismtraeakaafsndmvymekylenprhveiqvladgqgnaiylaerdcsmqrrhqkvveeapapgitpelrryigercakacvdigyrgagtfeflfengefyfiemntriqvehpvtemitgvdlikeqlriaagqplsikqeevhvrghavecrinaedpntflpspgkitrfhapggfgvrweshiyagytvppyydsmigklicygenrdvaiarmknalqeliidgiktnvdlqirimndenfqhggtnihylekklglqek]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=accC+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=accC]]&nbsp;&nbsp;
 
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===Notes===
===Notes===
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Mutations result in negative cooperativity with respect to the substrate bicarbonate.  Mutations in Arg 338 reveal arginine plays a role in carboxyl transfer to biotin.<ref name='LIB:EcoGene'/>




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==References==
==References==
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Latest revision as of 21:53, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

accC

Gene Synonym(s)

ECK3243, b3256, JW3224[1], fabG, JW3224

Product Desc.

AccC[2][3];

Component of biotin carboxylase[2][3]; acetyl CoA carboxylase[2][3]

Acetyl-CoA carboxylase, biotin carboxylase (BC) subunit[4]

Product Synonyms(s)

acetyl-CoA carboxylase, biotin carboxylase subunit[1], B3256[2][1], AccC[2][1] , ECK3243, fabG, JW3224, b3256

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): accBC[2]

Regulation/Activity
Quick Links



        

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Notes

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Mutations result in negative cooperativity with respect to the substrate bicarbonate. Mutations in Arg 338 reveal arginine plays a role in carboxyl transfer to biotin.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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