argP:Quickview: Difference between revisions

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{|   id="K49aee03a87742"  class=" tableEdit New_Quickview_Table" 
 
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[argP:Gene|''argP]]'' (synonyms: ''ECK2912, b2916, JW2883, iciA'')<ref name='LIB:Riley_2006'/>
''argP''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[argP:Gene_Product(s)|ArgP product]]<ref name='LIB:Riley_2006'/>: DNA-binding transcriptional activator, replication initiation inhibitor product, B2916 product, IciA product
''ECK2912, b2916, JW2883, iciA''<ref name='LIB:Riley_2006'/><ref name='PMID:10600368'/>, can, canR, iciA''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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ArgP transcriptional activator<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
ArgP transcriptional activator<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


Arginine and lysine responsive transcriptional regulator; inhibitor of chromosome initiation; positive regulator of argK, negative autoregulator in presence of arginine; oriC iteron (13-mer) binding protein, competes with DnaA for iteron binding; activate<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''DNA-binding transcriptional activator, replication initiation inhibitor<ref name='LIB:Riley_2006'/>, B2916<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ArgP<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, IciA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/><ref name='PMID:10600368' /> , can, canR, ECK2912, iciA, JW2883, b2916''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:argP|argP]]<ref name='LIB:EcoCyc10.6'/>, iciA  
transcription unit(s): [[:Category:Txn_unit:argP|argP]]<ref name='LIB:EcoCyc10.6'/>, iciA  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=argP&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10490]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000483&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=argP&loc=MG1655%3A3057775..3058668,W3110%3A3058409..3059302,DH10B%3A3151645..3152538,BW2952%3A2944923..2945816]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2944923&end=2945816&gene=argP&aa=mkrpdyrtlqaldavirergferaaqklcitqsavsqrikqlenmfgqpllvrtvpprpteqgqkllallrqvelleeewlgdeqtgstplllslavnadslatwllpalapvladspirlnlqvedetrtqerlrrgevvgavsiqhqalpsclvdklgaldylfvsskpfaekyfpngvtrsallkapvvafdhlddmhqaflqqnfdlppgsvpchivnsseafvqlarqgttccmiphlqiekelasgelidltpglfqrrmlywhrfapesrmmrkvtdalldyghkvlrqd]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=argP+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=argP]]&nbsp;&nbsp;
 
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===Notes===
===Notes===
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ArgP(IciA) is a LysR family transcriptional regulator.  argP mutants are canavanine sensitive.  argP is in the pho regulon. ArgP activates the dapB gene in te absense of lysine (Bouvier, 2008).<ref name='LIB:EcoGene'/>




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==References==
==References==
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Latest revision as of 21:53, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

argP

Gene Synonym(s)

ECK2912, b2916, JW2883, iciA[1][2], can, canR, iciA

Product Desc.

ArgP transcriptional activator[3][4]

Arginine and lysine responsive transcriptional regulator; inhibitor of chromosome initiation; positive regulator of argK, negative autoregulator in presence of arginine; oriC iteron (13-mer) binding protein, competes with DnaA for iteron binding; activate[5]

Product Synonyms(s)

DNA-binding transcriptional activator, replication initiation inhibitor[1], B2916[3][1], ArgP[3][1], IciA[3][1][2] , can, canR, ECK2912, iciA, JW2883, b2916

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): argP[3], iciA

Regulation/Activity
Quick Links



        

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Notes

[back to top]


ArgP(IciA) is a LysR family transcriptional regulator. argP mutants are canavanine sensitive. argP is in the pho regulon. ArgP activates the dapB gene in te absense of lysine (Bouvier, 2008).[5]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 Celis, RT (1999) Repression and activation of arginine transport genes in Escherichia coli K 12 by the ArgP protein. J. Mol. Biol. 294 1087-95 PubMed
  3. ↑ 3.0 3.1 3.2 3.3 3.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  5. ↑ 5.0 5.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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