infC:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''infC''  
''infC''
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK1716, b1718, JW5829, fit, srjA''<ref name='LIB:Riley_2006'/>
''ECK1716, b1718, JW5829, fit, srjA''<ref name='LIB:Riley_2006'/>, srjA''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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protein chain initiation factor IF-3<ref name='LIB:Riley_2006'/>, B1718<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Fit<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, SrjA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, InfC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, IF3<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''protein chain initiation factor IF-3<ref name='LIB:Riley_2006'/>, B1718<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Fit<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, SrjA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, InfC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, IF3<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK1716, fit, JW5829, srjA, b1718''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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'''Cellular Component'''
<GO_nr />
* GO:0005737 cytoplasm ([http://www.geneontology.org/GO.evidence.shtml IDA])
'''Biological Process'''
* GO:0009409 response to cold ([http://www.geneontology.org/GO.evidence.shtml IDA])
 
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=infC&loc=MG1655:1798662..1798120,W3110:1802352..1801810,REL606:1777797..1777363 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1777797&end=1777363&gene=infC&aa=mkggkrvqtarpnringeiraqevrltglegeqlgivslrealekaeeagvdlveispnaeppvcrimdygkflyeksksskeqkkkqkviqvkeikfrpgtdegdyqvklrslirfleegdkakitlrfrgremahqqigmevlnrvkddlqelavvesfptkiegrqmimvlapkkkq Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=infC+AND+escherichia+coli Pubmed(infC)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=infC Textpresso(infC)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=infC&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10506]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000499&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=infC&loc=MG1655%3A1798662..1798120,W3110%3A1802352..1801810,REL606%3A1777797..1777363,BW2952%3A1690179..1690721]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1690179&end=1690721&gene=infC&aa=mkggkrvqtarpnringeiraqevrltglegeqlgivslrealekaeeagvdlveispnaeppvcrimdygkflyeksksskeqkkkqkviqvkeikfrpgtdegdyqvklrslirfleegdkakitlrfrgremahqqigmevlnrvkddlqelavvesfptkiegrqmimvlapkkkq]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=infC+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=infC]]&nbsp;&nbsp;


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Latest revision as of 21:49, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

infC

Gene Synonym(s)

ECK1716, b1718, JW5829, fit, srjA[1], srjA

Product Desc.

protein chain initiation factor IF-3[2][3]

Protein chain initiation factor IF3; unusual AUU start codon[4]

Product Synonyms(s)

protein chain initiation factor IF-3[1], B1718[2][1], Fit[2][1], SrjA[2][1], InfC[2][1], IF3[2][1] , ECK1716, fit, JW5829, srjA, b1718

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): infC[2], thrS-infC-rpmI-rplT[2][3]

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

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HT_Cmplx17_Mem: InfC+RpsG.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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