parC:Quickview: Difference between revisions

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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[parC:Gene|''parC]]'' (synonyms: ''ECK3010, b3019, JW2987'')<ref name='LIB:Riley_2006'/>
''parC''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[parC:Gene_Product(s)|ParC product]]<ref name='LIB:Riley_2006'/>: DNA topoisomerase IV, subunit A product, B3019 product
''ECK3010, b3019, JW2987''<ref name='LIB:Riley_2006'/>, JW2987''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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topoisomerase IV subunit A<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
topoisomerase IV subunit A<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;
 
Component of [[Topoisomerase IV]]<ref name='LIB:EcoCyc11.1'/>


Component of [[:Category:Complex:dimer of topoisomerase IV subunit A|dimer of topoisomerase IV subunit A]]<ref name='LIB:EcoCyc11.1'/>,[[:Category:Complex:topoisomerase IV|topoisomerase IV]]<ref name='LIB:EcoCyc11.1'/>
Topoisomerase IV, subunit A, ATP-dependent, type II; chromosome decatenase; relaxes both positive and negative supercoils; DNA unknotting activity; heterotetrameric<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''DNA topoisomerase IV, subunit A<ref name='LIB:Riley_2006'/>, B3019<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ParC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK3010, JW2987, b3019''


Category:Complex:topoisomerase IV
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
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|-
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:parC|parC]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:parC|parC]]<ref name='LIB:EcoCyc10.6'/>  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=parC&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10686]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000679&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=parC&loc=MG1655%3A3163995..3161737,W3110%3A3164629..3162371,REL606%3A3100145..3097887,DH10B%3A3261740..3259482,BW2952%3A3048885..3051143]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3048885&end=3051143&gene=parC&aa=msdmaerlalheftenaylnysmyvimdralpfigdglkpvqrrivyamselglnasakfkksartvgdvlgkyhphgdsacyeamvlmaqpfsyryplvdgqgnwgapddpksfaamrytesrlskyselllselgqgtadwvpnfdgtlqepkmlparlpnillngttgiavgmatdipphnlrevaqaaialidqpkttldqlldivqgpdypteaeiitsraeirkiyengrgsvrmravwkkedgavvisalphqvsgarvleqiaaqmrnkklpmvddlrdesdhenptrlvivprsnrvdmdqvmnhlfattdleksyrinlnmigldgrpavknlleilsewlvfrrdtvrrrlnyrlekvlkrlhilegllvaflnidevieiirnedepkpalmsrfgltetqaeailelklrhlakleemkirgeqselekerdqlqgilaserkmnnllkkelqadaqaygddrrsplqereeakamsehdmlpsepvtivlsqmgwvrsakghdidapglnykagdsfkaavkgksnqpvvfvdstgrsyaidpitlpsargqgepltgkltlppgatvdhmlmesddqkllmasdagygfvctfndlvarnragkalitlpenahvmppvviedasdmllaitqagrmlmfpvsdlpqlskgkgnkiinipsaeaargedglaqlyvlppqstltihvgkrkiklrpeelqkvtgergrrgtlmrglqridrveidsprrassgdsee]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=parC+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=parC]]&nbsp;&nbsp;
 
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===Notes===
===Notes===
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{{BacktoTop}}
ParC physically interacts with SeqA. Topo IV is stimulated by SeqA.<ref name='LIB:EcoGene'/>




Latest revision as of 21:47, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

parC

Gene Synonym(s)

ECK3010, b3019, JW2987[1], JW2987

Product Desc.

topoisomerase IV subunit A[2][3];

Component of Topoisomerase IV[3]

Topoisomerase IV, subunit A, ATP-dependent, type II; chromosome decatenase; relaxes both positive and negative supercoils; DNA unknotting activity; heterotetrameric[4]

Product Synonyms(s)

DNA topoisomerase IV, subunit A[1], B3019[2][1], ParC[2][1] , ECK3010, JW2987, b3019

Category:Complex:topoisomerase IV

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): parC[2]

Regulation/Activity
Quick Links



        

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Notes

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ParC physically interacts with SeqA. Topo IV is stimulated by SeqA.[4]



References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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