uspF:Quickview: Difference between revisions

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{|   id="Y49b0280a9c205" class=" tableEdit New_Quickview_Table"


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!align=left {{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[uspF:Gene|''uspF]]'' (synonyms: ''ECK1371, b1376, JW1370, ynaF, yzzL, up03'')<ref name='LIB:Riley_2006'/>
''uspF''
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!align=left {{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[uspF:Gene_Product(s)|UspF product]]<ref name='LIB:Riley_2006'/>: stress-induced protein, ATP-binding protein product, B1376 product, YzzL product, YnaF product
''ECK1371, b1376, JW1370, ynaF, yzzL, up03''<ref name='LIB:Riley_2006'/>
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!align=left {{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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nucleotide binding protein<ref name='LIB:EcoCyc10.6'/> nucleotide binding filament protein<ref name='LIB:EcoCyc11.1'/>  
nucleotide binding protein<ref name='LIB:EcoCyc10.6'/>; nucleotide binding filament protein<ref name='LIB:EcoCyc11.1'/>


Stress-induced protein, binds ATP; dimer<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Product Synonyms(s)
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''stress-induced protein, ATP-binding protein<ref name='LIB:Riley_2006'/>, B1376<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YzzL<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, UspF<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YnaF<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK1371, JW1370, ynaF, yzzL, b1376''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:uspF|uspF]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:uspF|uspF]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=uspF&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G6699]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120003294&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=uspF&loc=MG1655%3A1433643..1433209,W3110%3A1437333..1436899,DH10B%3A1524238..1523804,BW2952%3A1325268..1325702]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1325268&end=1325702&gene=uspF&aa=mnsvitqkvssgvtlyadtktggfmnrtilvpidisdseltqrvishveeeakiddaevhfltvipslpyyaslglaysaelpamddlkaeaksqleeiikkfklptdrvhvhveegspkdrilelakkipahmiiiashrpdittyllgsnaaavvrhaecsvlvvr]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=uspF+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=uspF]]&nbsp;&nbsp;


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Latest revision as of 21:45, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

uspF

Gene Synonym(s)

ECK1371, b1376, JW1370, ynaF, yzzL, up03[1]

Product Desc.

nucleotide binding protein[2]; nucleotide binding filament protein[3]

Stress-induced protein, binds ATP; dimer[4]

Product Synonyms(s)

stress-induced protein, ATP-binding protein[1], B1376[2][1], YzzL[2][1], UspF[2][1], YnaF[2][1] , ECK1371, JW1370, ynaF, yzzL, b1376

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): uspF[2]

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


NMR solution structure determined for E. coli UspF(YnaF) (Saveanu, 2002). otherPDB (M. jannaschii): 1MJH.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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