rcsC:Quickview: Difference between revisions

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{{Tab On|Quickview|rcsC}}{{Tab|Gene|rcsC}}{{Tab|Gene Product(s)|rcsC}}{{Tab|Expression|rcsC}}{{Tab|Evolution|rcsC}}{{Tab|On One Page|rcsC}}{{TabsBottom}}
{{Tab On|Quickview|rcsC}}{{Tab|Gene|rcsC}}{{Tab|Gene Product(s)|rcsC}}{{Tab|Expression|rcsC}}{{Tab|Evolution|rcsC}}{{Tab|On One Page|rcsC}}{{TabsBottom}}
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[rcsC:Gene|''rcsC]]'' (synonyms: ''ECK2211, b2218, JW5917, JW5920, JW5920+JW5917'')<ref name='LIB:Riley_2006'/>
''rcsC''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[rcsC:Gene_Product(s)|RcsC product, RcsC product]]<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>: B2218 product, sensor protein RcsC product, unphosphorylated sensor protein RcsC product, unmodified sensor protein RcsC product
''ECK2211, b2218, JW5917, JW5920, JW5920+JW5917''<ref name='LIB:Riley_2006'/>
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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RcsC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
RcsC sensor kinase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


Negative regulatory gene for capsule (colanic acid) synthesis, controls sliminess; contains TerF; probable histidine kinase<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''hybrid sensory kinase in two-component regulatory system with RcsB and YojN<ref name='LIB:Riley_2006'/>, B2218<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, sensor protein RcsC-P<SUP>his</SUP><ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ECK2211, JW5917, JW5920, b2218''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:rcsC|rcsC]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:rcsC|rcsC]]<ref name='LIB:EcoCyc10.6'/>  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=rcsC&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10822]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000813&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=rcsC&loc=MG1655%3A2317850..2315049,W3110%3A2320735..2320361,W3110%3A2324498..2322075,W3110%3A2324498..2320361,REL606%3A2266528..2263727,DH10B%3A2408886..2406037,BW2952%3A2200854..2203703]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2200854&end=2203703&gene=rcsC&aa=mfralalvlwlliafssvfyivnalhqreseirqefnlssdqaqrfiqrtsdvmkelkyiaenrlsaengvlsprgretqadvpafeplfadsdcsamsntwrgsleslawfmrywrdnfsaaydlnrvfligsdnlcmanfglrdmpverdtalkalherinkyrnapqddsgsnlywisegprpgvgyfyaltpvylanrlqallgveqtirmenfflpgtlpmgvtildenghtlisltgpeskikgdprwmqerswfgytegfrelvlkknlppsslsivysvpvdkvlerirmlilnaillnvlagaalftlarmyerrifipaesdalrleeheqfnrkivasapvgicilrtadgvnilsnelahtylnmlthedrqrltqiicgqqvnfvdvltsnntnlqisfvhsryrnenvaicvlvdvssrvkmeeslqemaqaaeqasqsksmflatvshelrtplygiignldllqtkelpkgvdrlvtamnnssslllkiisdildfskieseqlkieprefsprevmnhitanylplvvrkqlglycfiepdvpvalngdpmrlqqvisnllsnaikftdtgcivlhvradgdylsirvrdtgvgipakevvrlfdpffqvgtgvqrnfqgtglglaiceklismmdgdisvdsepgmgsqftvriplygaqypqkkgveglsgkrcwlavrnaslcqfletslqrsgivvttyegqeptpedvlitdevvskkwqgravvtfcrrhigiplekapgewvhsvaaphelpallariyliemesddpanalpstdkavsdnddmmilvvddhpinrrlladqlgslgyqcktandgvdalnvlsknhidivlsdvnmpnmdgyrltqrirqlgltlpvigvtanalaeekqrclesgmdsclskpvtldvikqtltlyaervrksrds]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=rcsC+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=rcsC]]&nbsp;&nbsp;
 
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==Notes==
===Notes===
{{BacktoTop}}
 
 
 




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==References==
==References==
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Latest revision as of 21:43, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

rcsC

Gene Synonym(s)

ECK2211, b2218, JW5917, JW5920, JW5920+JW5917[1]

Product Desc.

RcsC sensor kinase[2][3]

Negative regulatory gene for capsule (colanic acid) synthesis, controls sliminess; contains TerF; probable histidine kinase[4]

Product Synonyms(s)

hybrid sensory kinase in two-component regulatory system with RcsB and YojN[1], B2218[2][1], sensor protein RcsC-Phis[2][1], ECK2211, JW5917, JW5920, b2218

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): rcsC[2]

Regulation/Activity
Quick Links



        

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Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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