recJ:Quickview: Difference between revisions

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{| id="H49b0220270852"  class=" tableEdit New_Quickview_Table"   
{|   id="H49b0220270852"  class=" tableEdit New_Quickview_Table"   


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!align=left {{table_heading_style}} |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''recJ''  
''recJ''
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK2887, b2892, JW2860''<ref name='LIB:Riley_2006'/>
''ECK2887, b2892, JW2860''<ref name='LIB:Riley_2006'/>, JW2860''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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ssDNA exonuclease, 5' --> 3'-specific<ref name='LIB:Riley_2006'/>, B2892<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RecJ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''ssDNA exonuclease, 5' --> 3'-specific<ref name='LIB:Riley_2006'/>, B2892<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RecJ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK2887, JW2860, b2892''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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'''Molecular Function'''
<GO_nr />
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IPI])
 
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=recJ&loc=MG1655:3036128..3034395,W3110:3036762..3035029,REL606:2923859..2922126,DH10B:3129998..3128265 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3129998&end=3128265&gene=recJ&aa=mkqqiqlrrrevdetadlpaelppllrrlyasrgvrsaqelersvkgmlpwqqlsgvekaveilynafregtriivvgdfdadgatstalsvlamrslgcsnidylvpnrfedgyglspevvdqahargaqlivtvdngisshagveharslgipvivtdhhlpgdtlpaaeaiinpnlrdcnfpskslagvgvafylmlalrtflrdqgwfderniaipnlaelldlvalgtvadvvpldannriltwqgmsriragkcrpgikallevanrdaqklaasdlgfalgprlnaagrlddmsvgvalllcdnigearvlaneldalnqtrkeieqgmqiealtlceklersrdtlpgglamyhpewhqgvvgilasrikerfhrpviafapagdgtlkgsgrsiqglhmrdalerldtlypgmmlkfgghamaaglsleedkfklfqqrfgelvtewldpsllqgevvsdgplspaemtmevaqllrdagpwgqmfpeplfdghfrllqqrlvgerhlkvmvepvgggplldgiafnvdtalwpdngvrevqlaykldinefrgnrslqiiidniwpi Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=recJ+AND+escherichia+coli Pubmed(recJ)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=recJ Textpresso(recJ)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=recJ&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10830]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000821&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=recJ&loc=MG1655%3A3036128..3034395,W3110%3A3036762..3035029,REL606%3A2923859..2922126,DH10B%3A3129998..3128265,BW2952%3A2921543..2923276]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2921543&end=2923276&gene=recJ&aa=mkqqiqlrrrevdetadlpaelppllrrlyasrgvrsaqelersvkgmlpwqqlsgvekaveilynafregtriivvgdfdadgatstalsvlamrslgcsnidylvpnrfedgyglspevvdqahargaqlivtvdngisshagveharslgipvivtdhhlpgdtlpaaeaiinpnlrdcnfpskslagvgvafylmlalrtflrdqgwfderniaipnlaelldlvalgtvadvvpldannriltwqgmsriragkcrpgikallevanrdaqklaasdlgfalgprlnaagrlddmsvgvalllcdnigearvlaneldalnqtrkeieqgmqiealtlceklersrdtlpgglamyhpewhqgvvgilasrikerfhrpviafapagdgtlkgsgrsiqglhmrdalerldtlypgmmlkfgghamaaglsleedkfklfqqrfgelvtewldpsllqgevvsdgplspaemtmevaqllrdagpwgqmfpeplfdghfrllqqrlvgerhlkvmvepvgggplldgiafnvdtalwpdngvrevqlaykldinefrgnrslqiiidniwpi]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=recJ+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=recJ]]&nbsp;&nbsp;


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Latest revision as of 21:43, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

recJ

Gene Synonym(s)

ECK2887, b2892, JW2860[1], JW2860

Product Desc.

RecJ[2][3]

ssDNA 5'-3' exonuclease involved in recombination[4]

Product Synonyms(s)

ssDNA exonuclease, 5' --> 3'-specific[1], B2892[2][1], RecJ[2][1] , ECK2887, JW2860, b2892

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): dsbC-recJ-prfB[2]

Regulation/Activity
Quick Links



        

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Notes

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Lovett and Kolodner (1989) N-terminally sequenced RecJ, but the native RBS was not used to direct translation, so it has been removed from the Verified Set. theless, the GTG start codon has been confirmed by mutational analysis in Haggerty and Lovett (1997).[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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