rep:Quickview: Difference between revisions

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*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
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{| id="M49b02221e38cb"  class=" tableEdit New_Quickview_Table"   
{|   id="M49b02221e38cb"  class=" tableEdit New_Quickview_Table"   


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!align=left {{table_heading_style}} |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''rep''  
''rep''
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK3770, b3778, JW5604, dasC, mbrA, mmrA, dasC?''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
''ECK3770, b3778, JW5604, dasC, mbrA, mmrA, dasC?''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>, mmrA?''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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DNA helicase and single-stranded DNA-dependent ATPase<ref name='LIB:Riley_2006'/>, B3778<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MmrA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MbrA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, DasC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Rep<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''DNA helicase and single-stranded DNA-dependent ATPase<ref name='LIB:Riley_2006'/>, B3778<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MmrA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MbrA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, DasC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Rep<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , dasC, ECK3770, JW5604, mbrA, mmrA?, b3778''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=rep&loc=MG1655:3958700..3960721,W3110:3676004..3673983,REL606:3922479..3924500,DH10B:4057620..4059641 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4057620&end=4059641&gene=rep&aa=mrlnpgqqqavefvtgpclvlagagsgktrvitnkiahlirgcgyqarhiaavtftnkaaremkervgqtlgrkearglmistfhtlgldiikreyaalgmkanfslfddtdqlallkelteglieddkvllqqlistisnwkndlktpsqaaasaigerdrifahcyglydahlkacnvldfddlillptlllqrneevrkrwqnkiryllvdeyqdtntsqyelvkllvgsrarftvvgdddqsiyswrgarpqnlvllsqdfpalkvikleqnyrssgrilkaaniliannphvfekrlfselgygaelkvlsanneeheaervtgeliahhfvnktqykdyailyrgnhqsrvfekflmqnripykisggtsffsrpeikdllaylrvltnpdddsaflrivntpkreigpatlkklgewamtrnksmftasfdmglsqtlsgrgyealtrfthwlaeiqrlaerepiaavrdlihgmdyeswlyetspspkaaemrmknvnqlfswmtemlegseldepmtltqvvtrftlrdmmergeseeeldqvqlmtlhaskglefpyvymvgmeegflphqssidednideerrlayvgitraqkeltftlckerrqygelvrpepsrfllelpqddliweqerkvvsaeermqkgqshlanlkammaakrgk Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=rep+AND+escherichia+coli Pubmed(rep)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=rep Textpresso(rep)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=rep&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10837]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000828&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=rep&loc=MG1655%3A3958700..3960721,W3110%3A3676004..3673983,REL606%3A3922479..3924500,DH10B%3A4057620..4059641,BW2952%3A3848369..3850390]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3848369&end=3850390&gene=rep&aa=mrlnpgqqqavefvtgpclvlagagsgktrvitnkiahlirgcgyqarhiaavtftnkaaremkervgqtlgrkearglmistfhtlgldiikreyaalgmkanfslfddtdqlallkelteglieddkvllqqlistisnwkndlktpsqaaasaigerdrifahcyglydahlkacnvldfddlillptlllqrneevrkrwqnkiryllvdeyqdtntsqyelvkllvgsrarftvvgdddqsiyswrgarpqnlvllsqdfpalkvikleqnyrssgrilkaaniliannphvfekrlfselgygaelkvlsanneeheaervtgeliahhfvnktqykdyailyrgnhqsrvfekflmqnripykisggtsffsrpeikdllaylrvltnpdddsaflrivntpkreigpatlkklgewamtrnksmftasfdmglsqtlsgrgyealtrfthwlaeiqrlaerepiaavrdlihgmdyeswlyetspspkaaemrmknvnqlfswmtemlegseldepmtltqvvtrftlrdmmergeseeeldqvqlmtlhaskglefpyvymvgmeegflphqssidednideerrlayvgitraqkeltftlckerrqygelvrpepsrfllelpqddliweqerkvvsaeermqkgqshlanlkammaakrgk]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=rep+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=rep]]&nbsp;&nbsp;


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Latest revision as of 21:43, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

rep

Gene Synonym(s)

ECK3770, b3778, JW5604, dasC, mbrA, mmrA, dasC?[1][2], mmrA?

Product Desc.

rep[2][3];

Component of rep helicase, a single-stranded DNA dependent ATPase[3]

ATP-dependent DNA helicase Rep, involved in DNA replication; ssDNA-dependent ATPase[4]

Product Synonyms(s)

DNA helicase and single-stranded DNA-dependent ATPase[1], B3778[2][1], MmrA[2][1], MbrA[2][1], DasC[2][1], Rep[2][1] , dasC, ECK3770, JW5604, mbrA, mmrA?, b3778

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): rep[2]

Regulation/Activity
Quick Links



        

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Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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