lepB:Evolution: Difference between revisions

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!|Organism!!Homologs (Statistics)!!Comments
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!|Database!!Accession!!Notes
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF00717 PFAM:PF00717]
[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=51306 SUPERFAMILY:51306]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
[http://www.pantherdb.org/ Panther] ([[Panther|EcoliWiki Page]])
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[http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12383:SF1 PTHR12383:SF1]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF00717 PF00717  Peptidase S24-like]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=51306 SUPERFAMILY:51306]
[http://pfam.janelia.org/family/PF10502 PF10502  Peptidase S26 ]
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[[EcoCyc]]
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EcoCyc:EG10530
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG10530
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120000523
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB0525
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0008450
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:34, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000027831 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT1G23465 (score: 1.000; bootstrap: 56%)
  • AT1G29960 (score: 0.901)
  • AT1G53530 (score: 0.302)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000000600 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00034014 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00007021 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000011156 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000016174 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000031178 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000278200 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Mus musculus

  • MGI:1913791 (score: 1.000; bootstrap: 100%)
  • MGI:3645325 (score: 0.981)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000006031 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000006406 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YMR035W (score: 1.000; bootstrap: 51%)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00003907001 (score: 1.000; bootstrap: 100%)
  • GSTENP00001785001 (score: 0.724)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000022866 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

LEPB

From SHIGELLACYC

E. coli O157

LEPB

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Superfamily (EcoliWiki Page)

SUPERFAMILY:51306

Panther (EcoliWiki Page)

PTHR12383:SF1

Pfam (EcoliWiki Page)

PF00717 Peptidase S24-like

Pfam (EcoliWiki Page)

PF10502 Peptidase S26

EcoCyc

EcoCyc:EG10530

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10530

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000523

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0525

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0008450

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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