nuoI:Evolution: Difference between revisions

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From ECOO157CYC  
From ECOO157CYC  


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!|Database!!Accession!!Notes
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF00037 PFAM:PF00037]
[http://pfam.janelia.org/family/PF00037 PF00037 4Fe-4S binding domain]
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[http://www.pantherdb.org/ Panther] ([[Panther|EcoliWiki Page]])
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[http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10849:SF4 PTHR10849:SF4]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=54862 SUPERFAMILY:54862]
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[[EcoCyc]]
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EcoCyc:EG12089
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG12089
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120001994
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB2013
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0007539
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:34, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000012187 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000011836 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT1G16700 (score: 1.000; bootstrap: 100%)
  • AT1G79010 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000016013 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00042331 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00020636 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000016330 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000019661 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Danio rerio

  • ZDB-CDNA-040425-3100 (score: 1.000; bootstrap: 100%)
  • ZDB-GENE-040426-2153 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040425-3218 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-050522-131 (score: 0.780)
  • ZDB-GENE-050522-131 (score: 0.780)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0169117 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0017567 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA17794-PA (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000315774 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000030525 (score: 1.000; bootstrap: 100%)
  • ENSMMUP00000001890 (score: 0.660)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000026657 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Mus musculus

  • MGI:2385079 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000006846 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000023526 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000147522 (score: 1.000; bootstrap: 100%)
  • NEWSINFRUP00000149365 (score: 0.727)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00024623001 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000045090 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

NUOI

From SHIGELLACYC

E. coli O157

NUOI

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF00037 4Fe-4S binding domain

Panther (EcoliWiki Page)

PTHR10849:SF4

Superfamily (EcoliWiki Page)

SUPERFAMILY:54862

EcoCyc

EcoCyc:EG12089

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG12089

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120001994

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB2013

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0007539

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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