ftsK:Evolution: Difference between revisions

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{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="W46abb16a83a28"  class=" tableEdit Evolution_homologs_table" 
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!Organism!!Homologs (Statistics)!!Comments
!|Organism!!Homologs (Statistics)!!Comments
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''Apis mellifera''   
''Apis mellifera''   
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From Inparanoid:20070104  
From Inparanoid:20070104  
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''Caenorhabditis briggsae''   
''Caenorhabditis briggsae''   
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From Inparanoid:20070104  
From Inparanoid:20070104  
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''Caenorhabditis elegans''   
''Caenorhabditis elegans''   
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From Inparanoid:20070104  
From Inparanoid:20070104  
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''Ciona intestinalis''   
''Ciona intestinalis''   
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From Inparanoid:20070104  
From Inparanoid:20070104  
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''Danio rerio''   
''Danio rerio''   
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From Inparanoid:20070104  
From Inparanoid:20070104  
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''Dictyostelium discoideum''   
''Dictyostelium discoideum''   
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From Inparanoid:20070104  
From Inparanoid:20070104  
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''Drosophila melanogaster''   
''Drosophila melanogaster''   
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From Inparanoid:20070104  
From Inparanoid:20070104  
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''Gallus gallus''   
''Gallus gallus''   
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From Inparanoid:20070104  
From Inparanoid:20070104  
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''Homo sapiens''   
''Homo sapiens''   
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From Inparanoid:20070104  
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''Macaca mulatta''   
''Macaca mulatta''   
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From Inparanoid:20070104  
From Inparanoid:20070104  
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''Mus musculus''   
''Mus musculus''   
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From Inparanoid:20070104  
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''Pan troglodytes''   
''Pan troglodytes''   
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''Xenopus tropicalis''   
''Xenopus tropicalis''   
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From Inparanoid:20070104  
From Inparanoid:20070104  
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''Shigella flexneri''   
''Shigella flexneri''   
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From SHIGELLACYC  
From SHIGELLACYC  
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''E. coli'' O157
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FTSK
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From ECOO157CYC
 
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{{Evolution_homologs_table_help}}
 


===Do-It-Yourself Web Tools===
===Do-It-Yourself Web Tools===
*[http://130.14.29.110/BLAST/ BLAST]
*[http://130.14.29.110/BLAST/ BLAST]
*[http://130.14.29.110/BLAST/Blast.cgi?CMD=Web&LAYOUT=TwoWindows&AUTO_FORMAT=Semiauto&ALIGNMENTS=250&ALIGNMENT_VIEW=Pairwise&CLIENT=web&COMPOSITION_BASED_STATISTICS=on&DATABASE=nr&CDD_SEARCH=on&DESCRIPTIONS=500&ENTREZ_QUERY=%28none%29&EXPECT=10&FORMAT_OBJECT=Alignment&FORMAT_TYPE=HTML&I_THRESH=0.005&MATRIX_NAME=BLOSUM62&NCBI_GI=on&PAGE=Proteins&PROGRAM=blastp&RUN_PSIBLAST=on&SERVICE=plain&SET_DEFAULTS.x=36&SET_DEFAULTS.y=5&SHOW_OVERVIEW=on&END_OF_HTTPGET=Yes&SHOW_LINKOUT=yes&GET_SEQUENCE=yes&SEARCH_NAME=psi_bp/ CDD]
*[http://130.14.29.110/BLAST/Blast.cgi?CMD=Web&LAYOUT=TwoWindows&AUTO_FORMAT=Semiauto&ALIGNMENTS=250&ALIGNMENT_VIEW=Pairwise&CLIENT=web&COMPOSITION_BASED_STATISTICS=on&DATABASE=nr&CDD_SEARCH=on&DESCRIPTIONS=500&ENTREZ_QUERY=%28none%29&EXPECT=10&FORMAT_OBJECT=Alignment&FORMAT_TYPE=HTML&I_THRESH=0.005&MATRIX_NAME=BLOSUM62&NCBI_GI=on&PAGE=Proteins&PROGRAM=blastp&RUN_PSIBLAST=on&SERVICE=plain&SET_DEFAULTS.x=36&SET_DEFAULTS.y=5&SHOW_OVERVIEW=on&END_OF_HTTPGET=Yes&SHOW_LINKOUT=yes&GET_SEQUENCE=yes&SEARCH_NAME=psi_bp/ CDD]
*[http://inparanoid.sbc.su.se/cgi-bin/eid_search.pl?id=NP_415410&idtype=all&start=on&species=All&conf=0.05 InParanoid]
*[http://inparanoid.sbc.su.se/cgi-bin/gene_search.cgi?id=NP_415410&idtype=all&all_or_selection=all&specieslist=1&scorelimit=0.05&.submit=Submit&.cgifields=specieslist&.cgifields=idtype&.cgifields=all_or_selection InParanoid]
*[http://www.sanger.ac.uk/PostGenomics/S_pombe/YOGY/ YOGY]
*[http://www.sanger.ac.uk/PostGenomics/S_pombe/YOGY/ YOGY]


<protect><!--Homology_notes--></protect>
<protect><!--Homology_notes--></protect>
===Notes===
===Notes===
 
The N-terminal domain sequence of FtsK is conserved only in proteobacteria while the C-terminus DNA translocation domain in conserved in most bacterial species<ref name='PMID:16194242'/><ref name='PMID:11459952'/><ref name='PMID:17973909'/>.


==Families==
==Families==
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!Database!!Accession!!Notes
!|Database!!Accession!!Notes
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF01580 PF01580  FtsK/SpoIIIE family]
|
|-
|
[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
|
[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=46785 SUPERFAMILY:46785]
|
|-  
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://www.pantherdb.org/ Panther] ([[Panther|EcoliWiki Page]])
|
|
[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF01580 PFAM:PF01580]
[http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22683:SF1 PTHR22683:SF1]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
|
[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=52540 SUPERFAMILY:52540]
|
|-
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
|
[http://pfam.janelia.org/family/PF09397 PF09397  Ftsk gamma domain]
|
|-
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[[EcoCyc]]
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EcoCyc:G6464
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-
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[[EcoGene]]
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EcoGene:EG13226
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-
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[[RegulonDB]]
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RegulonDB:ECK120003064
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-
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[[EchoBASE]]
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EchoBASE:EB3016
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-
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[[ASAP]]
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ASAP:ABE-0003027
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
 
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<protect><!--Families_notes--></protect>
<protect><!--Families_notes--></protect>
===Notes===
===Notes===
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==References==
==References==
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{{BacktoTop}}
{{RefHelp}}
{{RefHelp}}
<references/>
<references />
<noinclude>
__NOTOC__
__NOTOC__
[[Category:Genes with homologs in Apis mellifera ]][[Category:Genes with homologs in Caenorhabditis briggsae ]][[Category:Genes with homologs in Caenorhabditis elegans ]][[Category:Genes with homologs in Ciona intestinalis ]][[Category:Genes with homologs in Danio rerio ]][[Category:Genes with homologs in Dictyostelium discoideum ]][[Category:Genes with homologs in Drosophila melanogaster ]][[Category:Genes with homologs in Gallus gallus ]][[Category:Genes with homologs in Homo sapiens ]][[Category:Genes with homologs in Macaca mulatta ]][[Category:Genes with homologs in Mus musculus ]][[Category:Genes with homologs in Pan troglodytes ]][[Category:Genes with homologs in Xenopus tropicalis ]][[Category:Genes with homologs in Shigella flexneri ]][[Category:Genes with homologs in E. coli O157]]</noinclude>
===Categories===
{{BacktoTop}}
[[Category:Genes with homologs in Apis mellifera ]]
[[Category:Genes with homologs in Caenorhabditis briggsae ]]
[[Category:Genes with homologs in Caenorhabditis elegans ]]
[[Category:Genes with homologs in Ciona intestinalis ]]
[[Category:Genes with homologs in Danio rerio ]]
[[Category:Genes with homologs in Dictyostelium discoideum ]]
[[Category:Genes with homologs in Drosophila melanogaster ]]
[[Category:Genes with homologs in Gallus gallus ]]
[[Category:Genes with homologs in Homo sapiens ]]
[[Category:Genes with homologs in Macaca mulatta ]]
[[Category:Genes with homologs in Mus musculus ]]
[[Category:Genes with homologs in Pan troglodytes ]]
[[Category:Genes with homologs in Xenopus tropicalis ]]
[[Category:Genes with homologs in Shigella flexneri ]]
[[Category:Genes with homologs in E. coli O157]]

Latest revision as of 08:31, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Apis mellifera

  • ENSAPMP00000011742 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00032775 (score: 1.000; bootstrap: 84%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00004120 (score: 1.000; bootstrap: 61%)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000006114 (score: 1.000; bootstrap: 100%)
  • ENSCINP00000009221 (score: 0.082)
  • ENSCINP00000019637 (score: 0.053)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-040426-2032 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040425-2979 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0220598 (score: 1.000; bootstrap: 59%)
  • DDB0220698 (score: 0.241)
  • DDB0219424 (score: 0.232)
  • DDB0204496 (score: 0.232)
  • DDB0202465 (score: 0.232)
  • DDB0220473 (score: 0.223)
  • DDB0186879 (score: 0.214)
  • DDB0220092 (score: 0.207)
  • DDB0191294 (score: 0.206)
  • DDB0220695 (score: 0.204)
  • DDB0206355 (score: 0.203)
  • DDB0191586 (score: 0.203)
  • DDB0188286 (score: 0.201)
  • DDB0231210 (score: 0.196)
  • DDB0217693 (score: 0.191)
  • DDB0202946 (score: 0.191)
  • DDB0192024 (score: 0.190)
  • DDB0216864 (score: 0.188)
  • DDB0215257 (score: 0.180)
  • DDB0190401 (score: 0.180)
  • DDB0205029 (score: 0.178)
  • DDB0205680 (score: 0.177)
  • DDB0220086 (score: 0.177)
  • DDB0201626 (score: 0.177)
  • DDB0189741 (score: 0.177)
  • DDB0167841 (score: 0.175)
  • DDB0217027 (score: 0.175)
  • DDB0220518 (score: 0.174)
  • DDB0220120 (score: 0.174)
  • DDB0220085 (score: 0.174)
  • DDB0217746 (score: 0.174)
  • DDB0190773 (score: 0.172)
  • DDB0190924 (score: 0.172)
  • DDB0186048 (score: 0.170)
  • DDB0219997 (score: 0.167)
  • DDB0189801 (score: 0.167)
  • DDB0216409 (score: 0.167)
  • DDB0218010 (score: 0.167)
  • DDB0216189 (score: 0.166)
  • DDB0218446 (score: 0.162)
  • DDB0231755 (score: 0.162)
  • DDB0230050 (score: 0.162)
  • DDB0217416 (score: 0.162)
  • DDB0218812 (score: 0.159)
  • DDB0218153 (score: 0.159)
  • DDB0167208 (score: 0.158)
  • DDB0217222 (score: 0.158)
  • DDB0184424 (score: 0.158)
  • DDB0168158 (score: 0.158)
  • DDB0232248 (score: 0.156)
  • DDB0189892 (score: 0.156)
  • DDB0216341 (score: 0.154)
  • DDB0217895 (score: 0.154)
  • DDB0191073 (score: 0.153)
  • DDB0169513 (score: 0.153)
  • DDB0220491 (score: 0.153)
  • DDB0232328 (score: 0.153)
  • DDB0218472 (score: 0.151)
  • DDB0217365 (score: 0.150)
  • DDB0229362 (score: 0.150)
  • DDB0232322 (score: 0.150)
  • DDB0215670 (score: 0.150)
  • DDB0218258 (score: 0.150)
  • DDB0217236 (score: 0.150)
  • DDB0220481 (score: 0.150)
  • DDB0217043 (score: 0.148)
  • DDB0204126 (score: 0.148)
  • DDB0190492 (score: 0.146)
  • DDB0217593 (score: 0.145)
  • DDB0206180 (score: 0.143)
  • DDB0217417 (score: 0.140)
  • DDB0215378 (score: 0.140)
  • DDB0185465 (score: 0.140)
  • DDB0167981 (score: 0.140)
  • DDB0216921 (score: 0.138)
  • DDB0218621 (score: 0.138)
  • DDB0191191 (score: 0.137)
  • DDB0192193 (score: 0.137)
  • DDB0231700 (score: 0.137)
  • DDB0167801 (score: 0.137)
  • DDB0191361 (score: 0.135)
  • DDB0220001 (score: 0.135)
  • DDB0229382 (score: 0.135)
  • DDB0202354 (score: 0.132)
  • DDB0190606 (score: 0.132)
  • DDB0188826 (score: 0.132)
  • DDB0191409 (score: 0.132)
  • DDB0188175 (score: 0.130)
  • DDB0218306 (score: 0.130)
  • DDB0202163 (score: 0.130)
  • DDB0216403 (score: 0.130)
  • DDB0190785 (score: 0.129)
  • DDB0184127 (score: 0.129)
  • DDB0218626 (score: 0.129)
  • DDB0186751 (score: 0.127)
  • DDB0220704 (score: 0.127)
  • DDB0188246 (score: 0.125)
  • DDB0205385 (score: 0.125)
  • DDB0184207 (score: 0.125)
  • DDB0203776 (score: 0.125)
  • DDB0188933 (score: 0.125)
  • DDB0218594 (score: 0.125)
  • DDB0206066 (score: 0.124)
  • DDB0220467 (score: 0.124)
  • DDB0219334 (score: 0.122)
  • DDB0185803 (score: 0.122)
  • DDB0205043 (score: 0.122)
  • DDB0232321 (score: 0.119)
  • DDB0219621 (score: 0.119)
  • DDB0186491 (score: 0.119)
  • DDB0191321 (score: 0.119)
  • DDB0217237 (score: 0.119)
  • DDB0217138 (score: 0.119)
  • DDB0218866 (score: 0.117)
  • DDB0169488 (score: 0.117)
  • DDB0167087 (score: 0.116)
  • DDB0217187 (score: 0.116)
  • DDB0220097 (score: 0.116)
  • DDB0218566 (score: 0.114)
  • DDB0204506 (score: 0.114)
  • DDB0231554 (score: 0.113)
  • DDB0191385 (score: 0.113)
  • DDB0216544 (score: 0.113)
  • DDB0204403 (score: 0.113)
  • DDB0220494 (score: 0.113)
  • DDB0189822 (score: 0.111)
  • DDB0232928 (score: 0.111)
  • DDB0232160 (score: 0.109)
  • DDB0206051 (score: 0.109)
  • DDB0185056 (score: 0.108)
  • DDB0189620 (score: 0.108)
  • DDB0232078 (score: 0.108)
  • DDB0220595 (score: 0.108)
  • DDB0189968 (score: 0.108)
  • DDB0216392 (score: 0.108)
  • DDB0167764 (score: 0.106)
  • DDB0205713 (score: 0.106)
  • DDB0188213 (score: 0.106)
  • DDB0190152 (score: 0.106)
  • DDB0217700 (score: 0.105)
  • DDB0217078 (score: 0.105)
  • DDB0218867 (score: 0.105)
  • DDB0190271 (score: 0.105)
  • DDB0192215 (score: 0.103)
  • DDB0216943 (score: 0.101)
  • DDB0218236 (score: 0.100)
  • DDB0229429 (score: 0.100)
  • DDB0216342 (score: 0.100)
  • DDB0218050 (score: 0.100)
  • DDB0218102 (score: 0.100)
  • DDB0190787 (score: 0.100)
  • DDB0191116 (score: 0.100)
  • DDB0216260 (score: 0.100)
  • DDB0205150 (score: 0.100)
  • DDB0219211 (score: 0.098)
  • DDB0229845 (score: 0.098)
  • DDB0218256 (score: 0.096)
  • DDB0188369 (score: 0.096)
  • DDB0216546 (score: 0.096)
  • DDB0220499 (score: 0.095)
  • DDB0216391 (score: 0.095)
  • DDB0205447 (score: 0.095)
  • DDB0169529 (score: 0.095)
  • DDB0220471 (score: 0.095)
  • DDB0192199 (score: 0.093)
  • DDB0218196 (score: 0.093)
  • DDB0205871 (score: 0.093)
  • DDB0217649 (score: 0.093)
  • DDB0202340 (score: 0.093)
  • DDB0192013 (score: 0.093)
  • DDB0187983 (score: 0.093)
  • DDB0183969 (score: 0.092)
  • DDB0220492 (score: 0.092)
  • DDB0205687 (score: 0.092)
  • DDB0218037 (score: 0.092)
  • DDB0189487 (score: 0.092)
  • DDB0217708 (score: 0.092)
  • DDB0183931 (score: 0.090)
  • DDB0189893 (score: 0.090)
  • DDB0220516 (score: 0.088)
  • DDB0220683 (score: 0.088)
  • DDB0185762 (score: 0.088)
  • DDB0206470 (score: 0.088)
  • DDB0167229 (score: 0.087)
  • DDB0218840 (score: 0.087)
  • DDB0232152 (score: 0.087)
  • DDB0231001 (score: 0.085)
  • DDB0231454 (score: 0.085)
  • DDB0218029 (score: 0.085)
  • DDB0217451 (score: 0.085)
  • DDB0220441 (score: 0.085)
  • DDB0191499 (score: 0.085)
  • DDB0215388 (score: 0.085)
  • DDB0218154 (score: 0.085)
  • DDB0205961 (score: 0.084)
  • DDB0220630 (score: 0.084)
  • DDB0186352 (score: 0.084)
  • DDB0186385 (score: 0.084)
  • DDB0192130 (score: 0.082)
  • DDB0190674 (score: 0.082)
  • DDB0167294 (score: 0.082)
  • DDB0188687 (score: 0.080)
  • DDB0167538 (score: 0.080)
  • DDB0218210 (score: 0.080)
  • DDB0220136 (score: 0.080)
  • DDB0185453 (score: 0.080)
  • DDB0189561 (score: 0.080)
  • DDB0205575 (score: 0.079)
  • DDB0203240 (score: 0.079)
  • DDB0202718 (score: 0.079)
  • DDB0168645 (score: 0.079)
  • DDB0167751 (score: 0.079)
  • DDB0216935 (score: 0.079)
  • DDB0219636 (score: 0.077)
  • DDB0189138 (score: 0.077)
  • DDB0218235 (score: 0.077)
  • DDB0191806 (score: 0.077)
  • DDB0218069 (score: 0.077)
  • DDB0217843 (score: 0.077)
  • DDB0190877 (score: 0.077)
  • DDB0191498 (score: 0.077)
  • DDB0220490 (score: 0.077)
  • DDB0191753 (score: 0.076)
  • DDB0201966 (score: 0.076)
  • DDB0231197 (score: 0.076)
  • DDB0186448 (score: 0.076)
  • DDB0185180 (score: 0.074)
  • DDB0229364 (score: 0.074)
  • DDB0217360 (score: 0.074)
  • DDB0168034 (score: 0.074)
  • DDB0203430 (score: 0.074)
  • DDB0220705 (score: 0.072)
  • DDB0220087 (score: 0.072)
  • DDB0219309 (score: 0.071)
  • DDB0217883 (score: 0.071)
  • DDB0220624 (score: 0.071)
  • DDB0187027 (score: 0.069)
  • DDB0188637 (score: 0.069)
  • DDB0229847 (score: 0.069)
  • DDB0220678 (score: 0.069)
  • DDB0218171 (score: 0.069)
  • DDB0184423 (score: 0.069)
  • DDB0219954 (score: 0.069)
  • DDB0218341 (score: 0.069)
  • DDB0186697 (score: 0.069)
  • DDB0204418 (score: 0.068)
  • DDB0233011 (score: 0.068)
  • DDB0219396 (score: 0.068)
  • DDB0220608 (score: 0.068)
  • DDB0220623 (score: 0.066)
  • DDB0217977 (score: 0.066)
  • DDB0217507 (score: 0.066)
  • DDB0185296 (score: 0.066)
  • DDB0218242 (score: 0.066)
  • DDB0231340 (score: 0.066)
  • DDB0231692 (score: 0.066)
  • DDB0184080 (score: 0.066)
  • DDB0185964 (score: 0.066)
  • DDB0168602 (score: 0.066)
  • DDB0190902 (score: 0.066)
  • DDB0190200 (score: 0.066)
  • DDB0206023 (score: 0.064)
  • DDB0185671 (score: 0.064)
  • DDB0220477 (score: 0.064)
  • DDB0220094 (score: 0.064)
  • DDB0206169 (score: 0.064)
  • DDB0191859 (score: 0.063)
  • DDB0186434 (score: 0.063)
  • DDB0205093 (score: 0.063)
  • DDB0215408 (score: 0.063)
  • DDB0231506 (score: 0.063)
  • DDB0218398 (score: 0.061)
  • DDB0218173 (score: 0.061)
  • DDB0205432 (score: 0.061)
  • DDB0184253 (score: 0.061)
  • DDB0184153 (score: 0.061)
  • DDB0219903 (score: 0.061)
  • DDB0204566 (score: 0.061)
  • DDB0167634 (score: 0.061)
  • DDB0216146 (score: 0.061)
  • DDB0218526 (score: 0.061)
  • DDB0190114 (score: 0.059)
  • DDB0185095 (score: 0.059)
  • DDB0216369 (score: 0.059)
  • DDB0220029 (score: 0.059)
  • DDB0231774 (score: 0.058)
  • DDB0220507 (score: 0.058)
  • DDB0167013 (score: 0.058)
  • DDB0220438 (score: 0.058)
  • DDB0187840 (score: 0.058)
  • DDB0191512 (score: 0.058)
  • DDB0220118 (score: 0.056)
  • DDB0217915 (score: 0.056)
  • DDB0220095 (score: 0.056)
  • DDB0169210 (score: 0.056)
  • DDB0167912 (score: 0.056)
  • DDB0190500 (score: 0.056)
  • DDB0220643 (score: 0.056)
  • DDB0188671 (score: 0.056)
  • DDB0203640 (score: 0.055)
  • DDB0167082 (score: 0.055)
  • DDB0184018 (score: 0.055)
  • DDB0186991 (score: 0.055)
  • DDB0215968 (score: 0.055)
  • DDB0204798 (score: 0.055)
  • DDB0204588 (score: 0.055)
  • DDB0191514 (score: 0.055)
  • DDB0185224 (score: 0.055)
  • DDB0219308 (score: 0.053)
  • DDB0185366 (score: 0.053)
  • DDB0205039 (score: 0.053)
  • DDB0216052 (score: 0.053)
  • DDB0230104 (score: 0.053)
  • DDB0184005 (score: 0.053)
  • DDB0220493 (score: 0.053)
  • DDB0231216 (score: 0.053)
  • DDB0215091 (score: 0.051)
  • DDB0184166 (score: 0.051)
  • DDB0186147 (score: 0.051)
  • DDB0220693 (score: 0.051)
  • DDB0190296 (score: 0.051)
  • DDB0220509 (score: 0.051)
  • DDB0232331 (score: 0.051)
  • DDB0204114 (score: 0.051)
  • DDB0217783 (score: 0.051)
  • DDB0167741 (score: 0.051)
  • DDB0220697 (score: 0.051)
  • DDB0206012 (score: 0.051)
  • DDB0168793 (score: 0.051)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0030541 (score: 1.000; bootstrap: 56%)
  • FBgn0051626 (score: 0.068)
  • FBgn0010218 (score: 0.051)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000010284 (score: 1.000; bootstrap: 57%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000344579 (score: 1.000; bootstrap: 55%)
  • ENSP00000311997 (score: 0.050)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000015589 (score: 1.000; bootstrap: 54%)

From Inparanoid:20070104

Mus musculus

  • MGI:1919670 (score: 1.000; bootstrap: 51%)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000016262 (score: 1.000; bootstrap: 100%)
  • ENSPTRP00000015748 (score: 0.495)
  • ENSPTRP00000015205 (score: 0.450)
  • ENSPTRP00000015475 (score: 0.115)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000051723 (score: 1.000; bootstrap: 69%)
  • ENSXETP00000039820 (score: 0.059)
  • ENSXETP00000040556 (score: 0.057)

From Inparanoid:20070104

Shigella flexneri

FTSK

From SHIGELLACYC

E. coli O157

FTSK

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

The N-terminal domain sequence of FtsK is conserved only in proteobacteria while the C-terminus DNA translocation domain in conserved in most bacterial species[1][2][3].

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF01580 FtsK/SpoIIIE family

Superfamily (EcoliWiki Page)

SUPERFAMILY:46785

Panther (EcoliWiki Page)

PTHR22683:SF1

Superfamily (EcoliWiki Page)

SUPERFAMILY:52540

Pfam (EcoliWiki Page)

PF09397 Ftsk gamma domain

EcoCyc

EcoCyc:G6464

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG13226

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120003064

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB3016

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0003027

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ Geissler, B & Margolin, W (2005) Evidence for functional overlap among multiple bacterial cell division proteins: compensating for the loss of FtsK. Mol. Microbiol. 58 596-612 PubMed
  2. ↑ Barre, FX et al. (2001) Circles: the replication-recombination-chromosome segregation connection. Proc. Natl. Acad. Sci. U.S.A. 98 8189-95 PubMed
  3. ↑ Barre, FX (2007) FtsK and SpoIIIE: the tale of the conserved tails. Mol. Microbiol. 66 1051-5 PubMed

Categories

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