dinB:Evolution: Difference between revisions

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!|Organism!!Homologs (Statistics)!!Comments
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!|Database!!Accession!!Notes
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF00817 PFAM:PF00817]
[http://pfam.janelia.org/family/PF00817 PF00817 impB/mucB/samB family]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=100879 SUPERFAMILY:100879]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF11798 PF11798  IMS family HHH motif]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF11799 PF11799  impB/mucB/samB family C-terminal]
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[[EcoCyc]]
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EcoCyc:G6115
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG13141
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120002735
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB2935
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0000789
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:30, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000004566 (score: 1.000; bootstrap: 78%)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000013231 (score: 1.000; bootstrap: 66%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT1G49980 (score: 1.000; bootstrap: 51%)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000005265 (score: 1.000; bootstrap: 94%)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00041372 (score: 1.000; bootstrap: 84%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00017696 (score: 1.000; bootstrap: 86%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000013822 (score: 1.000; bootstrap: 86%)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000019294 (score: 1.000; bootstrap: 63%)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-050417-376 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-050417-377 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0187302 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0035150 (score: 1.000; bootstrap: 72%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA11465-PA (score: 1.000; bootstrap: 76%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000027018 (score: 1.000; bootstrap: 84%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000353425 (score: 1.000; bootstrap: 54%)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000008071 (score: 1.000; bootstrap: 94%)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000002591 (score: 1.000; bootstrap: 92%)

From Inparanoid:20070104

Mus musculus

  • MGI:1349767 (score: 1.000; bootstrap: 63%)
  • MGI:1929074 (score: 1.000; bootstrap: 66%)

From Inparanoid:20070104

Oryza gramene

  • Q654Y6 (score: 1.000; bootstrap: 51%)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000046606 (score: 1.000; bootstrap: 55%)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000029244 (score: 1.000; bootstrap: 89%)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YOR346W (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPCC5537c (score: 1.000; bootstrap: 83%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000163834 (score: 1.000; bootstrap: 68%)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00028682001 (score: 1.000; bootstrap: 80%)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000031908 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Shigella flexneri

DINP

From SHIGELLACYC

E. coli O157

DINP

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF00817 impB/mucB/samB family

Panther (EcoliWiki Page)

PTHR11076:SF12

Superfamily (EcoliWiki Page)

SUPERFAMILY:56672

Superfamily (EcoliWiki Page)

SUPERFAMILY:100879

Pfam (EcoliWiki Page)

PF11798 IMS family HHH motif

Pfam (EcoliWiki Page)

PF11799 impB/mucB/samB family C-terminal

EcoCyc

EcoCyc:G6115

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG13141

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120002735

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB2935

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0000789

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

[back to top]


See Help:References for how to manage references in EcoliWiki.


Categories

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