dnaK:Evolution: Difference between revisions

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!|Organism!!Homologs (Statistics)!!Comments
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!|Database!!Accession!!Notes
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF00012 PFAM:PF00012]
[http://pfam.janelia.org/family/PF00012 PF00012 Hsp70 protein]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=53067 SUPERFAMILY:53067]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=100920 SUPERFAMILY:100920]
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[[EcoCyc]]
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EcoCyc:EG10241
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG10241
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120000235
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB0237
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0000052
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:29, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000022995 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000007663 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT4G37910 (score: 1.000; bootstrap: 97%)
  • AT5G09590 (score: 0.570)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000015172 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00030552 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00002010 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000001849 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000013308 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-030828-12 (score: 1.000; bootstrap: 99%)
  • ZDB-CDNA-040425-391 (score: 1.000; bootstrap: 99%)
  • ZDB-CDNA-041024-1 (score: 0.988)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0215366 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0001220 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA21150-PA (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000003717 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000297185 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000007731 (score: 1.000; bootstrap: 100%)
  • ENSMMUP00000029223 (score: 0.477)
  • ENSMMUP00000006030 (score: 0.171)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000015137 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Mus musculus

  • MGI:96245 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Oryza gramene

  • Q6Z7L1 (score: 1.000; bootstrap: 99%)
  • Q8GTB0 (score: 0.788)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000029565 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000026696 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YJR045C (score: 1.000; bootstrap: 99%)
  • YEL030W (score: 0.594)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPAC6641 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000171346 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00034701001 (score: 1.000; bootstrap: 80%)
  • GSTENP00034205001 (score: 0.312)
  • GSTENP00016340001 (score: 0.310)
  • GSTENP00007191001 (score: 0.239)
  • GSTENP00007193001 (score: 0.217)
  • GSTENP00028179001 (score: 0.124)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000018420 (score: 1.000; bootstrap: 88%)

From Inparanoid:20070104

Shigella flexneri

DNAK

From SHIGELLACYC

E. coli O157

DNAK

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF00012 Hsp70 protein

Superfamily (EcoliWiki Page)

SUPERFAMILY:53067

Superfamily (EcoliWiki Page)

SUPERFAMILY:53067

Superfamily (EcoliWiki Page)

SUPERFAMILY:100920

EcoCyc

EcoCyc:EG10241

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10241

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000235

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0237

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0000052

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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