Cis Element:TerC: Difference between revisions

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__NOTOC__
__NOTOC__
==Cis element summary table==
==Cis element summary table==
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|-
!align=left {{table_heading_style}} |Standard Name
||
<i>TerC</i>
|-
!align=left {{table_heading_style}} |Synonyms
||
<i>psrA</i>
|-
!align=left {{table_heading_style}} |Function
||
Terminus of DNA replication
|-
!align=left {{table_heading_style}} |Location
||
34.6 minutes in MG1655
|-
!align=left {{table_heading_style}} |SO terms
||
 
 
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===Notes===
===Notes===


== Location and Sequence ==
== Location and Sequence ==
{{BacktoTop}}
{{BacktoTop}}
<newTableEdit>Template:Gene_location_table</newTableEdit>
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{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="D4989e9bc59765"  class=" tableEdit Gene_location_table" 
|- {{table_heading_style}}
!|Strain!!Map location!!Genome coordinates!!Genome browsers!!Sequence links
|-
|
[http://ecoliwiki.net/colipedia/index.php/MG1655 MG1655]
|
34.6 minutes
|
MG1655: 1607181..1607203<br />{{GBrowseFigureByCoord|1607181|1607203|ecoli|MG1655|DNA_unlabeled}}
|
{{GBrowseLink|ecoli|NC_000913|1607181|1607203|GBrowse(MG1655)}}
|
{{GBrowseFastaLink|ecoli|NC_000913|1607181|1607203|FASTA Dump}}
 
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===Notes===
===Notes===
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== Interactions==
== Interactions==
{{BacktoTop}}
{{BacktoTop}}
<newTableEdit>Template:Product_interactions_table</newTableEdit>
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!|Partner Type!!Partner!!Notes!!References!!Evidence
 
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===Notes===
===Notes===
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== Mutant alleles and phenotypes ==
== Mutant alleles and phenotypes ==
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{{BacktoTop}}
<newTableEdit>Template:Cis_Element_allele_table</newTableEdit>
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!|Allele!!Nt change(s)!!Phenotype: Type!!Phenotype: Description!!Reference!!Availability!!Comments
 
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===Notes===
===Notes===
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== Genetic Resources ==
== Genetic Resources ==
{{BacktoTop}}
{{BacktoTop}}
<newTableEdit>Template:Gene resource table </newTableEdit>  
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!|Resource!!Resource Type!!Source!!Notes/Reference
 
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===Notes===
===Notes===


== Accessions ==
== Accessions ==
{{BacktoTop}}
{{BacktoTop}}
<newTableEdit>Template:Gene accessions table</newTableEdit>
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{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="U4989e9bc5e29d"  class=" tableEdit Gene_accessions_table" 
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!|Database!!Accession!!Notes
|-
|
[http://www.ericbrc.org/portal/eric/default eric]
|
[http://www.ericbrc.org/asap/feature_info.php?LocationID=WIS&FeatureID=5074 TerC]
|
|-
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[[EcoCyc]]
|
EcoCyc:
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-
|
[[EcoGene]]
|
EcoGene:
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-
|
[[RegulonDB]]
|
RegulonDB:
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-
|
[[EchoBASE]]
|
EchoBASE:
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-
|
[[ASAP]]
|
ASAP:
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
 
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===Notes===
===Notes===
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{{BacktoTop}}
{{BacktoTop}}
{{RefHelp}}
{{RefHelp}}
<references/>
<references />


===Categories===
===Categories===
[[Category:Cis Element]]
[[Category:Cis Element|TerC]]

Latest revision as of 07:17, 27 May 2013

Cis element summary table

Standard Name

TerC

Synonyms

psrA

Function

Terminus of DNA replication

Location

34.6 minutes in MG1655

SO terms


edit table

Notes

Location and Sequence

[back to top]


See Help:Gene_location for help entering information in the Gene Location and DNA sequence table.

Strain Map location Genome coordinates Genome browsers Sequence links

MG1655

34.6 minutes

MG1655: 1607181..1607203
gbrowse_img.php?coord=1607181..1607203&genome=ecoli&name=MG1655&trackset=DNA_unlabeled&width=300&.png

edit table


Notes

Interactions

[back to top]


See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence
edit table


Notes

Mutant alleles and phenotypes

[back to top]


Allele Nt change(s) Phenotype: Type Phenotype: Description Reference Availability Comments
edit table


Notes

Genetic Resources

[back to top]


See Help:Gene_resources for help entering information into the Genetic Resources table.

Resource Resource Type Source Notes/Reference
edit table

Notes

Accessions

[back to top]


See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

eric

TerC

EcoCyc

EcoCyc:

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:

Escherichia coli str. K-12 substr. MG1655

edit table


Notes

References

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See Help:References for how to manage references in EcoliWiki.


Categories

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