Cis Element:TerF: Difference between revisions

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__NOTOC__
__NOTOC__
==Cis element summary table==
==Cis element summary table==
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|-
!align=left {{table_heading_style}} |Standard Name
||
<i>TerF</i>
|-
!align=left {{table_heading_style}} |Synonyms
||
 
|-
!align=left {{table_heading_style}} |Function
||
Terminus of DNA replication
|-
!align=left {{table_heading_style}} |Location
||
49.9 minutes in MG1655, located within the <i>rcsC </i> gene
|-
!align=left {{table_heading_style}} |SO terms
||
 
 
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===Notes===
===Notes===


== Location and Sequence ==
== Location and Sequence ==
{{BacktoTop}}
{{BacktoTop}}
<newTableEdit>Template:Gene_location_table</newTableEdit>
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{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="Y4989f21365796"  class=" tableEdit Gene_location_table" 
|- {{table_heading_style}}
!|Strain!!Map location!!Genome coordinates!!Genome browsers!!Sequence links
|-
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[http://ecoliwiki.net/colipedia/index.php/MG1655 MG1655]
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49.9 Minutes
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MG1655: 2315684..2315706<br />{{GBrowseFigureByCoord|2315684|2315706|ecoli|MG1655|DNA_unlabeled}}
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{{GBrowseLink|ecoli|NC_000913|2315684|2315706|GBrowse(MG1655)}}
|
{{GBrowseFastaLink|ecoli|NC_000913|2315684|2315706|FASTA Dump}}
 
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===Notes===
===Notes===
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== Interactions==
== Interactions==
{{BacktoTop}}
{{BacktoTop}}
<newTableEdit>Template:Product_interactions_table</newTableEdit>
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!|Partner Type!!Partner!!Notes!!References!!Evidence
 
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===Notes===
===Notes===
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== Mutant alleles and phenotypes ==
== Mutant alleles and phenotypes ==
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{{BacktoTop}}
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!|Allele!!Nt change(s)!!Phenotype: Type!!Phenotype: Description!!Reference!!Availability!!Comments
 
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===Notes===
===Notes===
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== Genetic Resources ==
== Genetic Resources ==
{{BacktoTop}}
{{BacktoTop}}
<newTableEdit>Template:Gene resource table </newTableEdit>  
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!|Resource!!Resource Type!!Source!!Notes/Reference
 
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===Notes===
===Notes===


== Accessions ==
== Accessions ==
{{BacktoTop}}
{{BacktoTop}}
<newTableEdit>Template:Gene accessions table</newTableEdit>
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{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="R4989f21369c1b"  class=" tableEdit Gene_accessions_table" 
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!|Database!!Accession!!Notes
|-
|
[http://www.ericbrc.org/portal/eric/default eric]
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[http://www.ericbrc.org/asap/feature_info.php?LocationID=WIS&FeatureID=7337 TerF]
|
|-
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[[EcoCyc]]
|
EcoCyc:
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-
|
[[EcoGene]]
|
EcoGene:
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-
|
[[RegulonDB]]
|
RegulonDB:
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-
|
[[EchoBASE]]
|
EchoBASE:
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-
|
[[ASAP]]
|
ASAP:
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
 
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===Notes===
===Notes===
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{{BacktoTop}}
{{BacktoTop}}
{{RefHelp}}
{{RefHelp}}
<references/>
<references />


===Categories===
===Categories===
[[Category:Cis Element]]
[[Category:Cis Element|TerF]]

Latest revision as of 07:17, 27 May 2013

Cis element summary table

Standard Name

TerF

Synonyms
Function

Terminus of DNA replication

Location

49.9 minutes in MG1655, located within the rcsC gene

SO terms


edit table

Notes

Location and Sequence

[back to top]


See Help:Gene_location for help entering information in the Gene Location and DNA sequence table.

Strain Map location Genome coordinates Genome browsers Sequence links

MG1655

49.9 Minutes

MG1655: 2315684..2315706
gbrowse_img.php?coord=2315684..2315706&genome=ecoli&name=MG1655&trackset=DNA_unlabeled&width=300&.png

edit table


Notes

Interactions

[back to top]


See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence
edit table


Notes

Mutant alleles and phenotypes

[back to top]


Allele Nt change(s) Phenotype: Type Phenotype: Description Reference Availability Comments
edit table


Notes

Genetic Resources

[back to top]


See Help:Gene_resources for help entering information into the Genetic Resources table.

Resource Resource Type Source Notes/Reference
edit table

Notes

Accessions

[back to top]


See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

eric

TerF

EcoCyc

EcoCyc:

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:

Escherichia coli str. K-12 substr. MG1655

edit table


Notes

References

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See Help:References for how to manage references in EcoliWiki.


Categories

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