Template:GO table reference: Difference between revisions

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<headings>
<headings>
Gene product||product
Gene product||product
Qualifier||qualifier|select| |NOT
Qualifier||qualifier|select| |NOT|Contributes to|Colocalizes with|Obsolete GO term|Under review
GO ID||go_id|text
GO ID||go_id|text
GO term name||go_term|lookupcalc|SELECT page_title from GO_archive.term WHERE go_id = '{{{go_id}}}' ORDER BY term_update DESC LIMIT 1|page_title|split|_!_|1
GO term name||go_term|GoTermLookup
Evidence Code||evidence|select| |IC: Inferred by Curator|IDA: Inferred from Direct Assay|IEA: Inferred from Electronic Annotation|IEP: Inferred from Expression Pattern|IGC: Inferred from Genomic Context|IGI: Inferred from Genetic Interaction|IMP: Inferred from Mutant Phenotype|IPI: Inferred from Physical Interaction|ISS: Inferred from Sequence or Structural Similarity|NAS: Non-traceable Author Statement|ND: No biological Data available|RCA: inferred from Reviewed Computational Analysis|TAS: Traceable Author Statement|NR: Not Recorded
Evidence Code||evidence|select| |EXP: Inferred from Experiment|IDA: Inferred from Direct Assay|IPI: Inferred from Physical Interaction|IMP: Inferred from Mutant Phenotype|IGI: Inferred from Genetic Interaction|IEP: Inferred from Expression Pattern|ISS: Inferred from Sequence or Structural Similarity|ISO: Inferred from Sequence Orthology|ISA: Inferred from Sequence Alignment|ISM: Inferred from Sequence Model|IGC: Inferred from Genomic Context|RCA: inferred from Reviewed Computational Analysis|TAS: Traceable Author Statement|NAS: Non-traceable Author Statement|IC: Inferred by Curator|ND: No biological Data available|IEA: Inferred from Electronic Annotation|
with/from||with|text
with/from||with|go_annotation|EcoliWiki|UniProtKB|InterPro|EcoCyc
Aspect||aspect|lookup|SELECT namespace from GO_archive.term WHERE go_id = '{{{go_id}}}' ORDER BY term_update DESC LIMIT 1|namespace
Aspect||aspect|AspectLookup
Notes
Notes||Notes
Status||status|calc|reqcomplete|go_id|product|go_term|evidence
Status||status|go_annotation
</headings>
</headings>
<heading_style>{{table heading style}}</heading_style>
<heading_style>{{table heading style}}</heading_style>
<datatable>1</datatable>
[[Category:Table templates|GO table reference]]
[[Category:Table templates|GO table reference]]

Latest revision as of 21:35, 6 June 2011

<headings> Gene product||product Qualifier||qualifier|select| |NOT|Contributes to|Colocalizes with|Obsolete GO term|Under review GO ID||go_id|text GO term name||go_term|GoTermLookup Evidence Code||evidence|select| |EXP: Inferred from Experiment|IDA: Inferred from Direct Assay|IPI: Inferred from Physical Interaction|IMP: Inferred from Mutant Phenotype|IGI: Inferred from Genetic Interaction|IEP: Inferred from Expression Pattern|ISS: Inferred from Sequence or Structural Similarity|ISO: Inferred from Sequence Orthology|ISA: Inferred from Sequence Alignment|ISM: Inferred from Sequence Model|IGC: Inferred from Genomic Context|RCA: inferred from Reviewed Computational Analysis|TAS: Traceable Author Statement|NAS: Non-traceable Author Statement|IC: Inferred by Curator|ND: No biological Data available|IEA: Inferred from Electronic Annotation| with/from||with|go_annotation|EcoliWiki|UniProtKB|InterPro|EcoCyc Aspect||aspect|AspectLookup Notes||Notes Status||status|go_annotation </headings> <heading_style>align='left' bgcolor='#CCCCFF'</heading_style> <datatable>1</datatable>

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