ycjU:Gene

From EcoliWiki
Jump to: navigation, search


Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Nomenclature Location(s) and DNA Sequence Alleles and Phenotypes Genetic Resources Accessions Links References Suggestions

<protect>

Nomenclature

<protect> See Help:Gene_nomenclature for help with entering information in the Gene Nomenclature table.

Standard name

pgmB

Mnemonic
Synonyms

ycjU, ECK1312, b1317, JW1310[1][2]


edit table

See Help:Gene_nomenclature for help with entering information in the Gene Nomenclature table. </protect>

Notes

Location(s) and DNA Sequence

<protect> See Help:Gene_location for help entering information in the Gene Location and DNA sequence table.

Strain Map location Genome coordinates Genome browsers Sequence links

MG1655

29.7 minutes

MG1655: 1378172..1378831
<gbrowseImage> name=NC_000913:1378172..1378831 source=MG1655 preset=GeneLocation </gbrowseImage>

W3110

W3110: 1381862..1382521
<gbrowseImage> name= NC_007779:1381862..1382521 source=W3110 preset=GeneLocation </gbrowseImage>


edit table

</protect>


Notes

Sequence Features

<protect> See Help:Gene_sequence_features for help in entering sequence features in EcoliWiki.

Feature Type Strain Genomic Location Evidence Reference Notes
edit table

</protect> See Help:Gene_sequence_features for help in entering sequence features in EcoliWiki. <protect></protect>

Notes

Alleles and Phenotypes

<protect> See Help:Gene_alleles for how to enter or edit alleles and phenotypes in EcoliWiki.

Allele Nt change(s) AA change(s) Phenotype: Type Phenotype: Description Reference Availability Comments
edit table

</protect> See Help:Gene_alleles for how to enter or edit alleles and phenotypes in EcoliWiki. <protect></protect>

Notes

Genetic Interactions

[back to top]


<protect>

Interactor Interaction Allele Score(s) Reference(s) Accessions Notes
edit table

</protect>

Genetic Resources

<protect> See Help:Gene_resources for help entering information into the Genetic Resources table.

Resource Resource Type Source Notes/Reference


edit table

</protect> See Help:Gene_resources for help entering information into the Genetic Resources table. <protect></protect>

Notes

Accessions in Other Databases

<protect> See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

EcoCyc

EcoCyc:G6655

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB3677

Escherichia coli str. K-12 substr. MG1655

EcoliGenExpDB (EcoliWiki Page)

EcoliGenExpDB:b1317

ECOL199310CYC (EcoliWiki Page)

ECOL199310CYC:C1789

EcoGene

EcoGene:EG13918

Escherichia coli str. K-12 substr. MG1655

ECOO157CYC (EcoliWiki Page)

ECOO157CYC:YCJU

RegulonDB

RegulonDB:ECK120003250

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0004420

Escherichia coli str. K-12 substr. MG1655

edit table

</protect>


See Help:Gene_accessions for help with entering information into the Gene Accessions table. <protect></protect>

Notes

Links

<protect>

References

See Help:References for how to manage references in EcoliWiki.

  1. ↑ Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7

</protect>

Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=ycjU:Gene&oldid=1393850"