ybhF:Evolution

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Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000028715 (score: 1.000; bootstrap: 97%)
  • ENSANGP00000027182 (score: 0.499)
  • ENSANGP00000009427 (score: 0.466)
  • ENSANGP00000022300 (score: 0.393)
  • ENSANGP00000010177 (score: 0.103)
  • ENSANGP00000009622 (score: 0.063)
  • YP_026225 (score: 0.116)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000021619 (score: 1.000; bootstrap: 99%)
  • ENSAPMP00000030441 (score: 0.069)
  • ENSAPMP00000029602 (score: 0.062)
  • YP_026225 (score: 0.138)

From Inparanoid:20070104

Arabidopsis thaliana

  • YP_026225 (score: 0.104)
  • AT2G41700 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000027679 (score: 1.000; bootstrap: 99%)
  • ENSBTAP00000037324 (score: 1.000; bootstrap: 99%)
  • ENSBTAP00000027537 (score: 0.448)
  • ENSBTAP00000023982 (score: 0.266)
  • ENSBTAP00000004518 (score: 0.179)
  • ENSBTAP00000020083 (score: 0.159)
  • ENSBTAP00000023523 (score: 0.147)
  • ENSBTAP00000003563 (score: 0.092)
  • ENSBTAP00000009063 (score: 0.087)
  • ENSBTAP00000008832 (score: 0.073)
  • ENSBTAP00000009089 (score: 0.067)
  • YP_026225 (score: 0.103)

From Inparanoid:20070104

Caenorhabditis briggsae

  • YP_026225 (score: 0.111)
  • WBGene00039310 (score: 1.000; bootstrap: 99%)
  • WBGene00033921 (score: 0.273)
  • WBGene00031585 (score: 0.234)
  • WBGene00031527 (score: 0.219)
  • WBGene00024527 (score: 0.078)

From Inparanoid:20070104

Caenorhabditis elegans

  • YP_026225 (score: 0.123)
  • WBGene00000022 (score: 1.000; bootstrap: 99%)
  • WBGene00000421 (score: 0.102)
  • WBGene00000020 (score: 0.097)
  • WBGene00000023 (score: 0.070)
  • WBGene00000021 (score: 0.061)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000029034 (score: 1.000; bootstrap: 99%)
  • ENSCAFP00000004019 (score: 0.433)
  • ENSCAFP00000029826 (score: 0.332)
  • ENSCAFP00000021078 (score: 0.167)
  • ENSCAFP00000004953 (score: 0.145)
  • ENSCAFP00000028642 (score: 0.139)
  • ENSCAFP00000026245 (score: 0.114)
  • YP_026225 (score: 0.090)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000013651 (score: 1.000; bootstrap: 99%)
  • YP_026225 (score: 0.120)

From Inparanoid:20070104

Dictyostelium discoideum

  • YP_026225 (score: 1.000; bootstrap: 92%)
  • DDB0219982 (score: 1.000; bootstrap: 64%)
  • DDB0201662 (score: 0.532)
  • DDB0191223 (score: 0.413)
  • DDB0191224 (score: 0.400)
  • DDB0201627 (score: 0.388)

From Inparanoid:20070104

Drosophila melanogaster

  • YP_026225 (score: 1.000; bootstrap: 96%)
  • FBgn0028539 (score: 1.000; bootstrap: 99%)
  • FBgn0052186 (score: 1.000; bootstrap: 69%)
  • FBgn0031170 (score: 0.207)
  • FBgn0036747 (score: 0.176)
  • FBgn0051213 (score: 0.167)
  • FBgn0034493 (score: 0.115)

From Inparanoid:20070104

Drosophila pseudoobscura

  • YP_026225 (score: 0.161)
  • GA16429-PA (score: 1.000; bootstrap: 98%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000006898 (score: 1.000; bootstrap: 99%)
  • ENSGALP00000006896 (score: 0.335)
  • ENSGALP00000003050 (score: 0.098)
  • ENSGALP00000033880 (score: 0.092)
  • ENSGALP00000024845 (score: 0.089)
  • ENSGALP00000005610 (score: 0.086)
  • ENSGALP00000006900 (score: 0.082)
  • ENSGALP00000009224 (score: 0.082)
  • YP_026225 (score: 0.107)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000263094 (score: 1.000; bootstrap: 99%)
  • ENSP00000297693 (score: 0.485)
  • ENSP00000354463 (score: 0.364)
  • ENSP00000347205 (score: 0.245)
  • ENSP00000272895 (score: 0.205)
  • ENSP00000321973 (score: 0.185)
  • ENSP00000351376 (score: 0.178)
  • ENSP00000319766 (score: 0.060)
  • ENSP00000342216 (score: 0.058)
  • ENSP00000269081 (score: 0.052)
  • ENSP00000284425 (score: 0.050)
  • YP_026225 (score: 0.111)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000025286 (score: 1.000; bootstrap: 81%)
  • ENSMMUP00000027135 (score: 0.227)
  • ENSMMUP00000021279 (score: 0.171)
  • ENSMMUP00000019445 (score: 0.171)
  • ENSMMUP00000028231 (score: 0.155)
  • ENSMMUP00000018213 (score: 0.129)
  • ENSMMUP00000024458 (score: 0.081)
  • ENSMMUP00000024479 (score: 0.077)
  • ENSMMUP00000024472 (score: 0.072)
  • ENSMMUP00000024040 (score: 0.058)
  • YP_026225 (score: 0.114)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000011751 (score: 1.000; bootstrap: 99%)
  • ENSMODP00000019506 (score: 0.131)
  • ENSMODP00000020336 (score: 0.090)
  • ENSMODP00000005823 (score: 0.089)
  • ENSMODP00000021580 (score: 0.079)
  • ENSMODP00000006922 (score: 0.076)
  • ENSMODP00000019249 (score: 0.059)
  • ENSMODP00000019768 (score: 0.052)
  • YP_026225 (score: 0.121)

From Inparanoid:20070104

Mus musculus

  • MGI:1351646 (score: 1.000; bootstrap: 99%)
  • MGI:99607 (score: 0.478)
  • MGI:109424 (score: 0.363)
  • MGI:99606 (score: 0.255)
  • MGI:2388707 (score: 0.197)
  • MGI:1351617 (score: 0.169)
  • MGI:3625331 (score: 0.144)
  • MGI:2388708 (score: 0.142)
  • MGI:2388709 (score: 0.134)
  • MGI:2388711 (score: 0.126)
  • MGI:2386607 (score: 0.063)
  • MGI:1351668 (score: 0.059)
  • MGI:2386796 (score: 0.059)
  • MGI:2386846 (score: 0.050)
  • YP_026225 (score: 0.104)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000016286 (score: 1.000; bootstrap: 99%)
  • ENSPTRP00000044984 (score: 0.306)
  • ENSPTRP00000016277 (score: 0.294)
  • ENSPTRP00000016280 (score: 0.159)
  • ENSPTRP00000016272 (score: 0.089)
  • ENSPTRP00000039513 (score: 0.074)
  • ENSPTRP00000016276 (score: 0.069)
  • YP_026225 (score: 0.124)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000017623 (score: 1.000; bootstrap: 99%)
  • ENSRNOP00000024564 (score: 0.452)
  • ENSRNOP00000017878 (score: 0.392)
  • ENSRNOP00000020339 (score: 0.250)
  • ENSRNOP00000034671 (score: 0.186)
  • ENSRNOP00000030281 (score: 0.159)
  • ENSRNOP00000011493 (score: 0.157)
  • ENSRNOP00000001933 (score: 0.113)
  • ENSRNOP00000005848 (score: 0.063)
  • ENSRNOP00000033528 (score: 0.062)
  • ENSRNOP00000005775 (score: 0.060)
  • YP_026225 (score: 0.099)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YP_026225 (score: 0.221)
  • YOL075C (score: 1.000; bootstrap: 69%)
  • YOR011W (score: 0.057)
  • YNR070W (score: 0.053)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000147412 (score: 1.000; bootstrap: 99%)
  • NEWSINFRUP00000157349 (score: 0.262)
  • NEWSINFRUP00000157760 (score: 0.252)
  • NEWSINFRUP00000161212 (score: 0.225)
  • NEWSINFRUP00000180809 (score: 0.218)
  • NEWSINFRUP00000128715 (score: 0.170)
  • NEWSINFRUP00000135822 (score: 0.107)
  • NEWSINFRUP00000177341 (score: 0.091)
  • YP_026225 (score: 0.126)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00006649001 (score: 1.000; bootstrap: 61%)
  • GSTENP00016635001 (score: 0.177)
  • GSTENP00012848001 (score: 0.155)
  • GSTENP00033523001 (score: 0.150)
  • GSTENP00030482001 (score: 0.097)
  • GSTENP00018525001 (score: 0.093)
  • GSTENP00027699001 (score: 0.089)
  • YP_026225 (score: 0.106)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000047540 (score: 1.000; bootstrap: 98%)
  • ENSXETP00000047611 (score: 0.494)
  • ENSXETP00000028044 (score: 0.301)
  • ENSXETP00000010067 (score: 0.280)
  • ENSXETP00000002114 (score: 0.100)
  • ENSXETP00000043682 (score: 0.092)
  • ENSXETP00000008626 (score: 0.091)
  • ENSXETP00000031194 (score: 0.090)
  • ENSXETP00000018027 (score: 0.065)
  • YP_026225 (score: 0.104)

From Inparanoid:20070104

Shigella flexneri

YBHF

From SHIGELLACYC

E. coli O157

YBHF

From ECOO157CYC

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Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF00005 ABC transporter

Pfam (EcoliWiki Page)

PF00005 ABC transporter

Superfamily (EcoliWiki Page)

SUPERFAMILY:52540

Superfamily (EcoliWiki Page)

SUPERFAMILY:52540

EcoCyc

EcoCyc:G6411

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG13314

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120003011

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB3098

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0002707

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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