stfR:Evolution

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Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Bos taurus

  • ENSBTAP00000038746 (score: 1.000; bootstrap: 51%)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00027418 (score: 1.000; bootstrap: 100%)
  • WBGene00027434 (score: 0.138)
  • WBGene00027431 (score: 0.127)
  • WBGene00027401 (score: 0.082)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00019540 (score: 1.000; bootstrap: 76%)
  • WBGene00008707 (score: 0.087)
  • WBGene00022649 (score: 0.086)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000000690 (score: 1.000; bootstrap: 68%)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000016155 (score: 1.000; bootstrap: 67%)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0189911 (score: 1.000; bootstrap: 93%)
  • DDB0185120 (score: 0.186)
  • DDB0203095 (score: 0.073)
  • DDB0168484 (score: 0.062)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000031553 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000322544 (score: 1.000; bootstrap: 78%)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000003259 (score: 1.000; bootstrap: 52%)

From Inparanoid:20070104

Oryza gramene

  • Q6KA29 (score: 1.000; bootstrap: 67%)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YDR534C (score: 1.000; bootstrap: 95%)
  • YOR383C (score: 0.107)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPBPJ46642 (score: 1.000; bootstrap: 61%)

From Inparanoid:20070104

Shigella flexneri

S0758

From SHIGELLACYC

E. coli O157

Z1918

From ECOO157CYC


Do-It-Yourself Web Tools

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Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Superfamily (EcoliWiki Page)

SUPERFAMILY:49464

Superfamily (EcoliWiki Page)

SUPERFAMILY:88874

Pfam (EcoliWiki Page)

PF03335 Phage tail fibre repeat

Pfam (EcoliWiki Page)

PF03335 Phage tail fibre repeat

Pfam (EcoliWiki Page)

PF03335 Phage tail fibre repeat

Pfam (EcoliWiki Page)

PF03335 Phage tail fibre repeat

Pfam (EcoliWiki Page)

PF03335 Phage tail fibre repeat

Pfam (EcoliWiki Page)

PF03335 Phage tail fibre repeat

Pfam (EcoliWiki Page)

PF03335 Phage tail fibre repeat

Pfam (EcoliWiki Page)

PF07484 Phage Tail Collar Domain

Pfam (EcoliWiki Page)

PF08400 Prophage tail fibre N-terminal

EcoCyc

EcoCyc:G6695

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG13370

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120003290

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB3152

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0004595

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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