sspA:Evolution

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Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Apis mellifera

  • ENSAPMP00000009071 (score: 1.000; bootstrap: 53%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT1G78380 (score: 1.000; bootstrap: 79%)
  • AT1G17180 (score: 0.734)
  • AT1G78370 (score: 0.707)
  • AT1G78360 (score: 0.675)
  • AT1G78340 (score: 0.667)
  • AT1G17170 (score: 0.653)
  • AT1G78320 (score: 0.631)
  • AT1G17190 (score: 0.610)
  • AT1G53680 (score: 0.528)
  • AT3G43800 (score: 0.463)
  • AT1G10360 (score: 0.220)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000005211 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000017435 (score: 0.378)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00039326 (score: 1.000; bootstrap: 52%)
  • WBGene00023684 (score: 0.402)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00001790 (score: 1.000; bootstrap: 53%)
  • WBGene00001791 (score: 0.519)
  • WBGene00021817 (score: 0.437)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000015576 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-040718-365 (score: 1.000; bootstrap: 70%)
  • ZDB-CDNA-040718-400 (score: 1.000; bootstrap: 71%)
  • ZDB-CDNA-041114-67 (score: 0.714)
  • ZDB-GENE-041114-67 (score: 0.714)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0035587 (score: 1.000; bootstrap: 46%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA18310-PA (score: 1.000; bootstrap: 51%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000032508 (score: 1.000; bootstrap: 67%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000278062 (score: 1.000; bootstrap: 100%)
  • ENSP00000334683 (score: 0.767)
  • ENSP00000345023 (score: 0.610)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000020110 (score: 1.000; bootstrap: 100%)
  • ENSMMUP00000020113 (score: 0.592)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000006704 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Mus musculus

  • MGI:1341859 (score: 1.000; bootstrap: 60%)

From Inparanoid:20070104

Oryza gramene

  • O24595 (score: 1.000; bootstrap: 69%)
  • Q9SES7 (score: 0.672)
  • Q8RW02 (score: 0.664)
  • Q8RW03 (score: 0.662)
  • Q8RW04 (score: 0.659)
  • Q9FQC0 (score: 0.623)
  • Q9ZP61 (score: 0.618)
  • O65032 (score: 0.611)
  • Q9FUE5 (score: 0.547)
  • Q69RL1 (score: 0.539)
  • Q60DP1 (score: 0.407)
  • Q7Y1E0 (score: 0.071)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000005155 (score: 1.000; bootstrap: 100%)
  • ENSPTRP00000026521 (score: 0.765)
  • ENSPTRP00000005157 (score: 0.605)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000017186 (score: 1.000; bootstrap: 100%)
  • ENSRNOP00000016851 (score: 0.499)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000154150 (score: 1.000; bootstrap: 68%)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00024925001 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000041366 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Shigella flexneri

SSPA

From SHIGELLACYC

E. coli O157

SSPA

From ECOO157CYC


Do-It-Yourself Web Tools

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Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF00043 Glutathione S-transferase, C-terminal domain

Pfam (EcoliWiki Page)

PF02798 Glutathione S-transferase, N-terminal domain

Superfamily (EcoliWiki Page)

SUPERFAMILY:47616

Superfamily (EcoliWiki Page)

SUPERFAMILY:52833

Panther (EcoliWiki Page)

PTHR11260:SF61

EcoCyc

EcoCyc:EG10977

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10977

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000966

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0970

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0010594

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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