rplB:Evolution

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Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000010416 (score: 1.000; bootstrap: 72%)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000021044 (score: 1.000; bootstrap: 82%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT2G44065 (score: 1.000; bootstrap: 69%)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000016951 (score: 1.000; bootstrap: 84%)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00028008 (score: 1.000; bootstrap: 84%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00004413 (score: 1.000; bootstrap: 85%)
  • WBGene00007120 (score: 0.611)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000002594 (score: 1.000; bootstrap: 76%)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000003238 (score: 1.000; bootstrap: 78%)

From Inparanoid:20070104

Danio rerio

  • ZDB-CDNA-040425-2610 (score: 1.000; bootstrap: 100%)
  • ZDB-GENE-040426-1670 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040425-2611 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0201605 (score: 1.000; bootstrap: 74%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0024939 (score: 1.000; bootstrap: 81%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA11728-PA (score: 1.000; bootstrap: 75%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000013983 (score: 1.000; bootstrap: 79%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000340552 (score: 1.000; bootstrap: 79%)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000003301 (score: 1.000; bootstrap: 94%)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000023698 (score: 1.000; bootstrap: 78%)

From Inparanoid:20070104

Mus musculus

  • MGI:1351622 (score: 1.000; bootstrap: 83%)

From Inparanoid:20070104

Oryza gramene

  • P41096 (score: 1.000; bootstrap: 92%)
  • P17788 (score: 1.000; bootstrap: 90%)
  • Q6ENS1 (score: 1.000; bootstrap: 90%)
  • Q6L3B9 (score: 1.000; bootstrap: 90%)
  • P17351 (score: 0.984)
  • Q6EN83 (score: 0.984)
  • Q7XR20 (score: 0.945)
  • P11534 (score: 0.835)
  • Q6YTM4 (score: 0.174)
  • Q6R9C6 (score: 0.133)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000031075 (score: 1.000; bootstrap: 79%)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000024380 (score: 1.000; bootstrap: 73%)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YEL050C (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPCC16C45 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000147401 (score: 1.000; bootstrap: 89%)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00025116001 (score: 1.000; bootstrap: 84%)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000033787 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

RPLB

From SHIGELLACYC

E. coli O157

RPLB

From ECOO157CYC


Do-It-Yourself Web Tools

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Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Superfamily (EcoliWiki Page)

SUPERFAMILY:50104

Superfamily (EcoliWiki Page)

SUPERFAMILY:50249

Panther (EcoliWiki Page)

PTHR13691:SF5

Pfam (EcoliWiki Page)

PF00181 Ribosomal Proteins L2, RNA binding domain

Pfam (EcoliWiki Page)

PF03947 Ribosomal Proteins L2, C-terminal domain

EcoCyc

EcoCyc:EG10865

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10865

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000856

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0858

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0010854

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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