rnr:Evolution

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Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000003705 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT2G17510 (score: 1.000; bootstrap: 100%)
  • AT1G77680 (score: 0.079)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000000481 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000026500 (score: 0.091)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00018612 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000007481 (score: 1.000; bootstrap: 96%)
  • ENSCAFP00000025455 (score: 0.189)
  • ENSCAFP00000016451 (score: 0.097)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000008123 (score: 1.000; bootstrap: 100%)
  • ENSCINP00000012409 (score: 0.109)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0189843 (score: 1.000; bootstrap: 100%)
  • DDB0192046 (score: 0.111)
  • DDB0206173 (score: 0.055)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0039183 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000012350 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000304580 (score: 1.000; bootstrap: 100%)
  • ENSP00000321583 (score: 0.185)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000001070 (score: 1.000; bootstrap: 100%)
  • ENSMMUP00000004924 (score: 0.132)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000000245 (score: 1.000; bootstrap: 100%)
  • ENSMODP00000012199 (score: 0.208)

From Inparanoid:20070104

Mus musculus

  • MGI:2442555 (score: 1.000; bootstrap: 100%)
  • MGI:2143272 (score: 0.118)

From Inparanoid:20070104

Oryza gramene

  • Q6Z6A3 (score: 1.000; bootstrap: 100%)
  • Q9SNK4 (score: 0.110)
  • Q8H885 (score: 0.095)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000010072 (score: 1.000; bootstrap: 95%)
  • ENSPTRP00000012297 (score: 0.072)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000029411 (score: 1.000; bootstrap: 100%)
  • ENSRNOP00000014071 (score: 0.224)
  • ENSRNOP00000025779 (score: 0.130)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YOL021C (score: 1.000; bootstrap: 95%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPBC26H80 (score: 1.000; bootstrap: 100%)
  • SPAC2C47c (score: 0.107)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000166614 (score: 1.000; bootstrap: 100%)
  • NEWSINFRUP00000153486 (score: 0.116)
  • NEWSINFRUP00000140976 (score: 0.095)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00008353001 (score: 1.000; bootstrap: 98%)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000027001 (score: 1.000; bootstrap: 100%)
  • ENSXETP00000034647 (score: 0.176)
  • ENSXETP00000049254 (score: 0.106)

From Inparanoid:20070104

Shigella flexneri

VACB

From SHIGELLACYC

E. coli O157

VACB

From ECOO157CYC


Do-It-Yourself Web Tools

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Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Superfamily (EcoliWiki Page)

SUPERFAMILY:50249

Panther (EcoliWiki Page)

PTHR23355:SF9

Pfam (EcoliWiki Page)

PF00773 RNB domain

Pfam (EcoliWiki Page)

PF00575 S1 RNA binding domain

Pfam (EcoliWiki Page)

PF08206 Ribonuclease B OB domain

Pfam (EcoliWiki Page)

PF08206 Ribonuclease B OB domain

Pfam (EcoliWiki Page)

PF08461 Ribonuclease R winged-helix domain

EcoCyc

EcoCyc:EG11259

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG11259

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120001234

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB1239

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0013678

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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