hisJ:Evolution

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Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Arabidopsis thaliana

  • AT2G17260 (score: 1.000; bootstrap: 100%)
  • AT1G42540 (score: 1.000; bootstrap: 100%)
  • AT4G35290 (score: 0.740)
  • AT3G51480 (score: 0.529)
  • AT1G05200 (score: 0.488)
  • AT2G32390 (score: 0.447)
  • AT2G32400 (score: 0.388)
  • AT2G29120 (score: 0.248)
  • AT2G29110 (score: 0.239)
  • AT2G24720 (score: 0.237)
  • AT2G29100 (score: 0.233)
  • AT2G24710 (score: 0.227)
  • AT5G11210 (score: 0.213)
  • AT5G27100 (score: 0.202)
  • AT4G31710 (score: 0.192)
  • AT5G11180 (score: 0.177)
  • AT3G07520 (score: 0.163)
  • AT5G48400 (score: 0.143)
  • AT5G48410 (score: 0.135)
  • AT3G04110 (score: 0.115)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000022788 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000024560 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000012214 (score: 0.428)
  • ENSBTAP00000026817 (score: 0.426)
  • ENSBTAP00000015567 (score: 0.402)
  • ENSBTAP00000032956 (score: 0.318)
  • ENSBTAP00000015717 (score: 0.218)
  • ENSBTAP00000006271 (score: 0.212)
  • ENSBTAP00000018244 (score: 0.177)
  • ENSBTAP00000000263 (score: 0.142)
  • ENSBTAP00000010376 (score: 0.126)
  • ENSBTAP00000015137 (score: 0.116)
  • ENSBTAP00000031756 (score: 0.113)
  • ENSBTAP00000035962 (score: 0.113)
  • ENSBTAP00000026819 (score: 0.111)
  • ENSBTAP00000035007 (score: 0.107)
  • ENSBTAP00000006272 (score: 0.050)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00001615 (score: 1.000; bootstrap: 77%)
  • WBGene00001614 (score: 0.223)
  • WBGene00001612 (score: 0.133)
  • WBGene00001613 (score: 0.130)
  • WBGene00001616 (score: 0.122)
  • WBGene00001617 (score: 0.115)
  • WBGene00001618 (score: 0.100)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000026248 (score: 1.000; bootstrap: 100%)
  • ENSCAFP00000023480 (score: 1.000; bootstrap: 100%)
  • ENSCAFP00000012708 (score: 0.661)
  • ENSCAFP00000021888 (score: 0.660)
  • ENSCAFP00000027399 (score: 0.652)
  • ENSCAFP00000014728 (score: 0.530)
  • ENSCAFP00000005336 (score: 0.285)
  • ENSCAFP00000012922 (score: 0.270)
  • ENSCAFP00000004975 (score: 0.269)
  • ENSCAFP00000017493 (score: 0.230)
  • ENSCAFP00000007350 (score: 0.138)
  • ENSCAFP00000028837 (score: 0.075)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-030616-53 (score: 1.000; bootstrap: 100%)
  • ZDB-GENE-040724-186 (score: 1.000; bootstrap: 100%)
  • ZDB-GENE-020125-5 (score: 0.896)
  • ZDB-GENE-030131-8013 (score: 0.705)
  • ZDB-GENE-020125-3 (score: 0.697)
  • ZDB-GENE-020125-4 (score: 0.673)
  • ZDB-GENE-040913-1 (score: 0.143)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0020429 (score: 1.000; bootstrap: 100%)
  • FBgn0038840 (score: 1.000; bootstrap: 100%)
  • FBgn0028422 (score: 1.000; bootstrap: 100%)
  • FBgn0051201 (score: 0.561)
  • FBgn0004620 (score: 0.386)
  • FBgn0038837 (score: 0.364)
  • FBgn0031293 (score: 0.319)
  • FBgn0039927 (score: 0.282)
  • FBgn0026255 (score: 0.233)
  • FBgn0028431 (score: 0.215)
  • FBgn0039916 (score: 0.189)
  • FBgn0004619 (score: 0.176)
  • FBgn0031634 (score: 0.079)
  • FBgn0010399 (score: 0.071)
  • FBgn0053513 (score: 0.050)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA15505-PA (score: 1.000; bootstrap: 100%)
  • GA13857-PA (score: 0.059)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000285900 (score: 1.000; bootstrap: 100%)
  • ENSP00000330148 (score: 1.000; bootstrap: 100%)
  • ENSP00000296526 (score: 0.666)
  • ENSP00000282499 (score: 0.656)
  • ENSP00000264357 (score: 0.644)
  • ENSP00000282020 (score: 0.561)
  • ENSP00000296893 (score: 0.307)
  • ENSP00000296212 (score: 0.298)
  • ENSP00000311646 (score: 0.298)
  • ENSP00000301218 (score: 0.249)
  • ENSP00000278723 (score: 0.249)
  • ENSP00000316696 (score: 0.090)
  • ENSP00000293190 (score: 0.061)
  • ENSP00000279593 (score: 0.057)
  • ENSP00000263269 (score: 0.053)
  • ENSP00000332549 (score: 0.051)

From Inparanoid:20070104

Mus musculus

  • MGI:95808 (score: 1.000; bootstrap: 100%)
  • MGI:95812 (score: 1.000; bootstrap: 100%)
  • MGI:95809 (score: 0.661)
  • MGI:95811 (score: 0.650)
  • MGI:95810 (score: 0.638)
  • MGI:95813 (score: 0.558)
  • MGI:95815 (score: 0.310)
  • MGI:95816 (score: 0.297)
  • MGI:95818 (score: 0.249)
  • MGI:95817 (score: 0.248)
  • MGI:95814 (score: 0.243)
  • MGI:95819 (score: 0.089)
  • MGI:95822 (score: 0.066)
  • MGI:95821 (score: 0.059)
  • MGI:95823 (score: 0.053)
  • MGI:95820 (score: 0.053)

From Inparanoid:20070104

Oryza gramene

  • Q69L09 (score: 1.000; bootstrap: 100%)
  • Q653Y6 (score: 1.000; bootstrap: 100%)
  • Q8LH04 (score: 0.567)
  • Q6ZGL7 (score: 0.509)
  • Q69L15 (score: 0.505)
  • Q69L11 (score: 0.503)
  • Q69L07 (score: 0.501)
  • Q7XP59 (score: 0.501)
  • Q69L05 (score: 0.492)
  • Q5QLP6 (score: 0.360)
  • Q6K4P7 (score: 0.309)
  • Q69NA4 (score: 0.281)
  • Q69NA5 (score: 0.253)
  • Q69TK2 (score: 0.207)
  • Q5VMN1 (score: 0.195)
  • Q69KL0 (score: 0.145)
  • Q69TK3 (score: 0.121)
  • Q69KL2 (score: 0.098)
  • Q69TK5 (score: 0.095)
  • Q69KK7 (score: 0.092)
  • Q69KK9 (score: 0.059)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000132779 (score: 1.000; bootstrap: 100%)
  • NEWSINFRUP00000148659 (score: 1.000; bootstrap: 100%)
  • NEWSINFRUP00000150370 (score: 0.633)
  • NEWSINFRUP00000141976 (score: 0.612)
  • NEWSINFRUP00000130630 (score: 0.605)
  • NEWSINFRUP00000171567 (score: 0.605)
  • NEWSINFRUP00000172679 (score: 0.562)
  • NEWSINFRUP00000131012 (score: 0.525)
  • NEWSINFRUP00000161099 (score: 0.502)
  • NEWSINFRUP00000127449 (score: 0.252)
  • NEWSINFRUP00000161407 (score: 0.250)
  • NEWSINFRUP00000176766 (score: 0.248)
  • NEWSINFRUP00000178985 (score: 0.248)
  • NEWSINFRUP00000170962 (score: 0.215)
  • NEWSINFRUP00000148099 (score: 0.202)
  • NEWSINFRUP00000148098 (score: 0.196)
  • NEWSINFRUP00000169694 (score: 0.139)
  • NEWSINFRUP00000153442 (score: 0.139)
  • NEWSINFRUP00000127386 (score: 0.083)
  • NEWSINFRUP00000127414 (score: 0.075)
  • NEWSINFRUP00000166281 (score: 0.073)
  • NEWSINFRUP00000172202 (score: 0.072)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00011565001 (score: 1.000; bootstrap: 73%)
  • GSTENP00031562001 (score: 0.406)
  • GSTENP00032629001 (score: 0.213)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000040166 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

HISJ

From SHIGELLACYC

E. coli O157

HISJ

From ECOO157CYC

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Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF00497 Bacterial extracellular solute-binding proteins, family 3

Superfamily (EcoliWiki Page)

SUPERFAMILY:53850

EcoCyc

EcoCyc:EG12124

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG12124

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120002027

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB2045

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0007617

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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Categories

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