dctA:Evolution

From EcoliWiki
Jump to: navigation, search

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

[back to top]


See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000027697 (score: 1.000; bootstrap: 99%)
  • ENSANGP00000021612 (score: 0.421)
  • ENSANGP00000027123 (score: 0.160)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000019721 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000024287 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000018050 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000010206 (score: 0.484)
  • ENSBTAP00000017953 (score: 0.426)
  • ENSBTAP00000016615 (score: 0.402)
  • ENSBTAP00000016762 (score: 0.388)
  • ENSBTAP00000025456 (score: 0.272)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00024341 (score: 1.000; bootstrap: 100%)
  • WBGene00034793 (score: 0.408)
  • WBGene00028255 (score: 0.306)
  • WBGene00026282 (score: 0.306)
  • WBGene00027606 (score: 0.248)
  • WBGene00024821 (score: 0.224)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00001623 (score: 1.000; bootstrap: 100%)
  • WBGene00001620 (score: 0.417)
  • WBGene00001621 (score: 0.319)
  • WBGene00001624 (score: 0.289)
  • WBGene00001622 (score: 0.236)
  • WBGene00001625 (score: 0.173)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000003046 (score: 1.000; bootstrap: 100%)
  • ENSCAFP00000006242 (score: 1.000; bootstrap: 100%)
  • ENSCAFP00000004745 (score: 0.427)
  • ENSCAFP00000027598 (score: 0.422)
  • ENSCAFP00000010244 (score: 0.394)
  • ENSCAFP00000023841 (score: 0.386)
  • ENSCAFP00000028288 (score: 0.258)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000015374 (score: 1.000; bootstrap: 100%)
  • ENSCINP00000011730 (score: 0.507)
  • ENSCINP00000001643 (score: 0.084)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-040718-414 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040718-455 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040425-3230 (score: 0.417)
  • ZDB-GENE-030131-2159 (score: 0.417)
  • ZDB-CDNA-040425-3053 (score: 0.411)
  • ZDB-CDNA-040425-1504 (score: 0.393)
  • ZDB-GENE-030131-7779 (score: 0.393)
  • ZDB-GENE-030616-566 (score: 0.295)
  • ZDB-CDNA-040718-244 (score: 0.058)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0026439 (score: 1.000; bootstrap: 100%)
  • FBgn0026438 (score: 0.227)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA17658-PA (score: 1.000; bootstrap: 100%)
  • GA16330-PA (score: 0.219)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000005658 (score: 1.000; bootstrap: 100%)
  • ENSGALP00000001020 (score: 1.000; bootstrap: 100%)
  • ENSGALP00000000775 (score: 0.628)
  • ENSGALP00000017343 (score: 0.581)
  • ENSGALP00000016539 (score: 0.388)
  • ENSGALP00000012767 (score: 0.361)
  • ENSGALP00000014306 (score: 0.253)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000265113 (score: 1.000; bootstrap: 100%)
  • ENSP00000303623 (score: 1.000; bootstrap: 100%)
  • ENSP00000221742 (score: 0.613)
  • ENSP00000234256 (score: 0.455)
  • ENSP00000287857 (score: 0.403)
  • ENSP00000262352 (score: 0.390)
  • ENSP00000278379 (score: 0.380)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000000178 (score: 1.000; bootstrap: 100%)
  • ENSMMUP00000008151 (score: 0.408)
  • ENSMMUP00000005788 (score: 0.294)
  • ENSMMUP00000002315 (score: 0.288)
  • ENSMMUP00000009985 (score: 0.251)
  • ENSMMUP00000013455 (score: 0.167)
  • ENSMMUP00000029175 (score: 0.074)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000025454 (score: 1.000; bootstrap: 100%)
  • ENSMODP00000011359 (score: 1.000; bootstrap: 100%)
  • ENSMODP00000018100 (score: 0.588)
  • ENSMODP00000004049 (score: 0.410)
  • ENSMODP00000000586 (score: 0.393)
  • ENSMODP00000019226 (score: 0.375)
  • ENSMODP00000024743 (score: 0.363)

From Inparanoid:20070104

Mus musculus

  • MGI:99917 (score: 1.000; bootstrap: 100%)
  • MGI:105305 (score: 1.000; bootstrap: 100%)
  • MGI:1096331 (score: 0.616)
  • MGI:2135601 (score: 0.431)
  • MGI:2444087 (score: 0.400)
  • MGI:105083 (score: 0.397)
  • MGI:101931 (score: 0.377)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000028807 (score: 1.000; bootstrap: 99%)
  • ENSPTRP00000035480 (score: 0.391)
  • ENSPTRP00000006085 (score: 0.382)
  • ENSPTRP00000041631 (score: 0.197)
  • ENSPTRP00000001284 (score: 0.178)
  • ENSPTRP00000020582 (score: 0.112)
  • ENSPTRP00000019210 (score: 0.089)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000022319 (score: 1.000; bootstrap: 100%)
  • ENSRNOP00000021455 (score: 1.000; bootstrap: 100%)
  • ENSRNOP00000009931 (score: 0.571)
  • ENSRNOP00000016557 (score: 0.403)
  • ENSRNOP00000007002 (score: 0.401)
  • ENSRNOP00000020272 (score: 0.397)
  • ENSRNOP00000046952 (score: 0.374)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000182450 (score: 1.000; bootstrap: 100%)
  • NEWSINFRUP00000157480 (score: 0.478)
  • NEWSINFRUP00000132702 (score: 0.467)
  • NEWSINFRUP00000164620 (score: 0.322)
  • NEWSINFRUP00000135542 (score: 0.310)
  • NEWSINFRUP00000139924 (score: 0.288)
  • NEWSINFRUP00000161628 (score: 0.285)
  • NEWSINFRUP00000177126 (score: 0.285)
  • NEWSINFRUP00000143486 (score: 0.284)
  • NEWSINFRUP00000167345 (score: 0.228)
  • NEWSINFRUP00000164715 (score: 0.206)
  • NEWSINFRUP00000177480 (score: 0.205)
  • NEWSINFRUP00000180372 (score: 0.188)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00014834001 (score: 1.000; bootstrap: 100%)
  • GSTENP00011666001 (score: 1.000; bootstrap: 100%)
  • GSTENP00014833001 (score: 0.800)
  • GSTENP00018793001 (score: 0.538)
  • GSTENP00021479001 (score: 0.434)
  • GSTENP00018207001 (score: 0.329)
  • GSTENP00006570001 (score: 0.277)
  • GSTENP00009151001 (score: 0.257)
  • GSTENP00013364001 (score: 0.233)
  • GSTENP00004302001 (score: 0.192)
  • GSTENP00027743001 (score: 0.160)
  • GSTENP00002653001 (score: 0.094)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000013404 (score: 1.000; bootstrap: 100%)
  • ENSXETP00000047357 (score: 0.553)
  • ENSXETP00000017680 (score: 0.402)
  • ENSXETP00000025556 (score: 0.386)
  • ENSXETP00000019186 (score: 0.377)
  • ENSXETP00000016454 (score: 0.375)
  • ENSXETP00000030608 (score: 0.295)
  • ENSXETP00000045897 (score: 0.247)
  • ENSXETP00000039614 (score: 0.210)

From Inparanoid:20070104

Shigella flexneri

DCTA

From SHIGELLACYC

E. coli O157

DCTA

From ECOO157CYC

edit table


Do-It-Yourself Web Tools

<protect></protect>

Notes

Families

[back to top]


See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Superfamily (EcoliWiki Page)

SUPERFAMILY:118215

Pfam (EcoliWiki Page)

PF00375 Sodium:dicarboxylate symporter family

EcoCyc

EcoCyc:EG20044

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG20044

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120002437

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB4140

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0011527

Escherichia coli str. K-12 substr. MG1655

edit table

<protect></protect>

Notes

Links

[back to top]



References

[back to top]


See Help:References for how to manage references in EcoliWiki.


Categories

[back to top]


Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=dctA:Evolution&oldid=1391561"