Phage lambda nu1:Gene
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| Nomenclature | Location(s) and DNA Sequence | Sequence Features | Alleles and Phenotypes | Genetic Interactions | Genetic Resources | Accessions | Links | References | Suggestions |
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Nomenclature
See Help:Gene_nomenclature for help with entering information in the Gene Nomenclature table.
| Standard name |
Phage lambda nu1 |
|---|---|
| Mnemonic | |
| Synonyms |
nu1, lambdap01 |
| edit table |
See Help:Gene_nomenclature for help with entering information in the Gene Nomenclature table. </protect>
Notes
Location(s) and DNA Sequence
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See Help:Gene_location for help entering information in the Gene Location and DNA sequence table.
| Strain | Map location | Genome coordinates | Genome browsers | Sequence links |
|---|---|---|---|---|
|
NC_001416 |
NC_001416: 191..736 |
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| edit table |
See Help:Gene_location for help entering information in the Gene Location and DNA sequence table. </protect>
Notes
Sequence Features
See Help:Gene_sequence_features for help in entering sequence features in EcoliWiki.
| Feature Type | Strain | Genomic Location | Evidence | Reference | Notes |
|---|---|---|---|---|---|
|
Coding Start (SO:0000323) |
Phage lambda |
bp 191 |
Edman degradation |
Tomka and Catalano (1993) J. Biol. Chem. 268: 3056-3065. |
gpNu1 end established by N-terminal sequencing. |
|
encodes helix-turn-helix motif |
Phage lambda |
bp 203-262 encode helix-turn-helix DNA binding motif |
NMR structure |
deBeer, et al. (2002) Mol. Cell 9:305-315 |
|
|
encodes wing |
Phage lambda |
bp 280-307 encode wing of winged helix-turn-helix DNA binding motif. |
NMR structure |
deBeer et al. (2002) Mol. Cell 9:305-315 Hwang and Feiss (1997) Virology 231:524-535 |
Mutations affecting gpNu1 wing residue lysine-35 alter the strength and specificity of holoterminase interactions with DNA. |
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Notes
Alleles and Phenotypes
See Help:Gene_alleles for how to enter or edit alleles and phenotypes in EcoliWiki.
| Allele | Nt change(s) | AA change(s) | Phenotype: Type | Phenotype: Description | Reference | Availability | Comments |
|---|---|---|---|---|---|---|---|
| edit table |
See Help:Gene_alleles for how to enter or edit alleles and phenotypes in EcoliWiki. <protect></protect>
Notes
Genetic Interactions
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| Interactor | Interaction | Allele | Score(s) | Reference(s) | Accessions | Notes |
|---|---|---|---|---|---|---|
| edit table |
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Notes
Genetic Resources
See Help:Gene_resources for help entering information into the Genetic Resources table.
| Resource | Resource Type | Source | Notes/Reference |
|---|---|---|---|
| edit table |
See Help:Gene_resources for help entering information into the Genetic Resources table. <protect></protect>
Notes
Accessions in Other Databases
See Help:Gene_accessions for help with entering information into the Gene Accessions table.
| Database | Accession | Notes |
|---|---|---|
| edit table |
See Help:Gene_accessions for help with entering information into the Gene Accessions table. <protect></protect>
Notes
Links
| Name | URL | Comments |
|---|---|---|
| edit table |
See Help:Links_table for how to enter or edit information in this section of EcoliWiki.
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References
See Help:References for how to manage references in EcoliWiki.
