Cis Element:Phage lambda cos
Cis element summary table
| Standard Name |
lambda cos |
|---|---|
| Synonyms |
cohesive end site |
| Function |
Recognition and cleavage site for Lambda terminase |
| Location |
cos site includes roughly nt 48462-48502 through nt 1 - 132 (PMID:419690[1], PMID:419695[2], PMID:666898[3]) cos junction is located at nt 1-12 |
| SO terms |
|
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Notes
Location and Sequence
See Help:Gene_location for help entering information in the Gene Location and DNA sequence table.
| Strain | Map location | Genome coordinates | Genome browsers | Sequence links |
|---|---|---|---|---|
|
Phage lambda (NC_001416) |
NC_001416: 1..132 |
|||
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Notes
Interactions
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| Partner Type | Partner | Notes | References | Evidence |
|---|---|---|---|---|
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Notes
Mutant alleles and phenotypes
| Allele | Nt change(s) | Phenotype: Type | Phenotype: Description | Reference | Availability | Comments |
|---|---|---|---|---|---|---|
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Notes
Ber et al. 1984. [4] identified an IHF site required for packaging.
Genetic Resources
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| Resource | Resource Type | Source | Notes/Reference |
|---|---|---|---|
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Notes
Accessions
See Help:Gene_accessions for help with entering information into the Gene Accessions table.
| Database | Accession | Notes |
|---|---|---|
|
EcoCyc: |
Escherichia coli str. K-12 substr. MG1655 | |
|
EcoGene: |
Escherichia coli str. K-12 substr. MG1655 | |
|
RegulonDB: |
Escherichia coli str. K-12 substr. MG1655 | |
|
EchoBASE: |
Escherichia coli str. K-12 substr. MG1655 | |
|
ASAP: |
Escherichia coli str. K-12 substr. MG1655 | |
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Notes
References
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- ↑ Feiss, M & Siegele, DA (1979) Packaging of the bacteriophage lambda chromosome: dependence of cos cleavage on chromosome length. Virology 92 190-200 PubMed
- ↑ Feiss, M et al. (1979) Packaging of the bacteriophage lambda chromosome: a role for base sequences outside cos. Virology 92 56-67 PubMed
- ↑ Nichols, BP & Donelson, JE (1978) 178-Nucleotide sequence surrounding the cos site of bacteriophage lambda DNA. J. Virol. 26 429-34 PubMed
- ↑ Bear, SE et al. (1984) An accessory role for Escherichia coli integration host factor: characterization of a lambda mutant dependent upon integration host factor for DNA packaging. J. Virol. 52 966-72 PubMed