alsC:Gene Product(s)
| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| Nomenclature | Function | Interactions | Localization | Sequence | Structure | Resources | Accessions | Links | References | Suggestions |
Nomenclature
| Standard name |
AlsC product |
|---|---|
| Synonyms |
D-allose transporter subunit[1], membrane component of ABC superfamily[1], B4086[2][1], YjcV[2][1], AlsC[2][1] |
| Product description |
YjcV[2]; YjcV[3]; Component of D-allose ABC transporter[2]; D-allose ABC transporter[2]; D-allose ABC transporter[3] |
| EC number (for enzymes) |
|
| edit table | |
See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.
Notes
Function
Gene Ontology
| Qualifier | GO ID | GO term name | Reference(s) | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
|
GO:0016052 |
carbohydrate catabolic process |
P |
Seeded from EcoCyc 11.1[3]. |
required fields missing | ||||
| edit table |
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.
Interactions
| Partner Type | Partner | Notes |
|---|---|---|
|
Protein |
Subunits of D-allose ABC transporter |
could be indirect |
| edit table |
See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.
Notes
Localization
| Compartment | Description | Evidence | Notes |
|---|---|---|---|
|
plasma membrane |
From EcoCyc[3] | ||
| edit table |
Notes
Structure and Physical Properties
Physical Properties
| Sequence |
MGFTTRVKSE ASEKKPFNFA LFWDKYGTFF ILAIIVAIFG SLSPEYFLTT NNITQIFVQS SVTVLIGMGE FFAILVAGID LSVGAILALS GMVTAKLMLA GVDPFLAAMI GGVLVGGALG AINGCLVNWT GLHPFIITLG TNAIFRGITL VISDANSVYG FSFDFVNFFA ASVIGIPVPV IFSLIVALIL WFLTTRMRLG RNIYALGGNK NSAFYSGIDV KFHILVVFII SGVCAGLAGV VSTARLGAAE PLAGMGFETY AIASAIIGGT SFFGGKGRIF SVVIGGLIIG TINNGLNILQ VQTYYQLVVM GGLIIAAVAL DRLISK |
|---|---|
| Mol. Wt |
34.32 kDa (calc) [2] |
| pI | |
| Extinction coefficient |
28420 - 28670 (calc based on 8 Y, 3 W, and 2 C residues) |
| edit table | |
See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.
Domains/Motifs/Modification Sites
| Type | Residues | Description | Notes |
|---|---|---|---|
| edit table |
See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.
Structure
See Help:Product_structure for help entering or editing information in this section of EcoliWiki.
Notes
Gene Product Resources
| Resource type | Source | Notes/Reference |
|---|---|---|
| edit table |
See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.
Notes
Accessions in Other Databases
| Database | Accession | Notes |
|---|---|---|
| edit table |
See Help:Product_accessions for help entering or editing information in this section of EcoliWiki.
Notes
Links
References
See Help:References for how to manage references in EcoliWiki.
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 3.2 3.3 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7