Cis Element:dif

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Cis element summary table

Standard Name

dif

Synonyms

deletion-induced filamentation

Function

Recombination site in terminus

Location

34.2 minutes in MG1655

SO terms


Notes

Location and Sequence

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Strain Map location Genome coordinates Genome browsers Sequence links

MG1655

34.2 minutes

MG1655: 1588774..1588801
gbrowse_img.php?coord=1588774..1588801&genome=ecoli&name=MG1655&trackset=DNA_unlabeled&width=300&.png


Notes

The site is a 28bp sequence located in the "dif activity zone" (DAZ).

Interactions

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Partner Type Partner Notes References Evidence

Protein

XerC

PMID:11114887[1]

Protein

XerD

PMID:11114887[1]



Notes

Mutant alleles and phenotypes

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Allele Nt change(s) Phenotype: Type Phenotype: Description Reference Availability Comments


Notes

Genetic Resources

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Resource Resource Type Source Notes/Reference

Notes

Accessions

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Database Accession Notes

eric

dif



Notes

References

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  1. ↑ 1.0 1.1 Barre, FX et al. (2000) FtsK functions in the processing of a Holliday junction intermediate during bacterial chromosome segregation. Genes Dev. 14 2976-88 PubMed

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