baeR:Gene Product(s)

From EcoliWiki
Revision as of 13:23, 28 July 2007 by imported>WikiEntryBot (Automated import of articles)
Jump to navigation Jump to search

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Nomenclature Function Interactions Localization Sequence Structure Resources Accessions Links References Suggestions

Nomenclature

Standard name

BaeR product

BaeR product

Synonyms

DNA-binding response regulator in two-component regulatory system with BaeS product[1], B2079 product[2][1], BaeR-Pasp product[2][1]

B2079 product[2], transcriptional regulatory protein BaeR product[2], unphosphorylated transcriptional regulatory protein BaeR product[2], unmodified transcriptional regulatory protein BaeR product[2]

Product description

BaeR-Phosphorylated transcriptional activator[2][3]

BaeR transcriptional regulator[2][3]

EC number (for enzymes)
edit table

See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Notes

Function

[back to top]


Gene Ontology

BaeR-Phosphorylated transcriptional activator

Qualifier GO ID GO term name Reference(s) Evidence Code with/from Aspect Notes Status

GO:0006350

transcription

P

Seeded from EcoCyc 11.1[3].

required fields missing

GO:0005737

cytoplasm

C

Seeded from EcoCyc 11.1[3].

required fields missing

GO:0016563

transcription activator activity

F

Seeded from EcoCyc 11.1[3].

required fields missing

edit table

BaeR transcriptional regulator

Qualifier GO ID GO term name Reference(s) Evidence Code with/from Aspect Notes Status

GO:0006350

transcription

P

Seeded from EcoCyc 11.1[3].

required fields missing

GO:0005737

cytoplasm

C

Seeded from EcoCyc 11.1[3].

required fields missing

GO:0016563

transcription activator activity

F

Seeded from EcoCyc 11.1[3].

required fields missing

edit table

See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Interactions

BaeR-Phosphorylated transcriptional activator

Partner Type Partner Notes
edit table

BaeR transcriptional regulator

Partner Type Partner Notes
edit table

See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Notes

Localization

Compartment Description Evidence Notes

cytoplasm

From EcoCyc[3]

edit table


Notes

Structure and Physical Properties

[back to top]


Physical Properties

Sequence

at EcoCyc

MTELPIDENT PRILIVEDEP KLGQLLIDYL RAASYAPTLI SHGDQVLPYV RQTPPDLILL
DLMLPGTDGL TLCREIRRFS DIPIVMVTAK IEEIDRLLGL EIGADDYICK PYSPREVVAR
VKTILRRCKP QRELQQQDAE SPLIIDEGRF QASWRGKMLD LTPAEFRLLK TLSHEPGKVF
SREQLLNHLY DDYRVVTDRT IDSHIKNLRR KLESLDAEQS FIRAVYGVGY RWEADACRIV

at EcoCyc

 
Mol. Wt

27.66 kDa (calc) [2]

27.66 kDa (calc) [2]

pI

5.8[2]

Extinction coefficient

24410 - 24910 (calc based on 9 Y, 2 W, and 4 C residues)

0 (calc based on 0 Y, 0 W, and 0 C residues)

edit table

See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Domains/Motifs/Modification Sites

Type Residues Description Notes
edit table

See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Structure

Structure Type Organism Accession Residues covered Notes
edit table

See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Notes

Gene Product Resources

[back to top]


Resource type Source Notes/Reference
edit table

See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Notes

Accessions in Other Databases

[back to top]


Database Accession Notes

EcoCyc (EcoliWiki Page)

EcoCyc:PHOSPHO-BAER

UniProt (EcoliWiki Page)

UniProt:P30846

PFAM (EcoliWiki Page)

PFAM:PF00072

RefSeq (EcoliWiki Page)

RefSeq:NP_416583

ModBase (EcoliWiki Page)

ModBase:P30846

SwissModel (EcoliWiki Page)

SwissModel:P69228

UniProt (EcoliWiki Page)

UniProt:P69228

ModBase (EcoliWiki Page)

ModBase:P69228

edit table

See Help:Product_accessions for help entering or editing information in this section of EcoliWiki.

Notes

Links

[back to top]


Name URL Comments
edit table

See Help:Links_table for how to enter or edit information in this section of EcoliWiki.


References

[back to top]


See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.00 2.01 2.02 2.03 2.04 2.05 2.06 2.07 2.08 2.09 2.10 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 3.3 3.4 3.5 3.6 3.7 3.8 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7