deoR:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Standard Name
!align=left |Standard Name
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''deoR''  
''deoR''  
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left |Gene Synonym(s)
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''ECK0830, b0840, JW0824, nucR''<ref name='LIB:Riley_2006'/>
''ECK0830, b0840, JW0824, nucR''<ref name='LIB:Riley_2006'/>
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!align=left {{table_heading_style}} |Product Desc.
!align=left |Product Desc.
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DeoR transcriptional repressor<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
DeoR transcriptional repressor<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
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Repressor for deo operon, nupG and tsx; binds deoxyribose-5-phosphate inducer<ref name='LIB:EcoGene'/>
Repressor for deo operon, nupG and tsx; binds deoxyribose-5-phosphate inducer<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left |Product Synonyms(s)
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DNA-binding transcriptional repressor<ref name='LIB:Riley_2006'/>, B0840<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, NucR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, DeoR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, transcriptional repressor for deo operon, tsx, nupG<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
DNA-binding transcriptional repressor<ref name='LIB:Riley_2006'/>, B0840<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, NucR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, DeoR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, transcriptional repressor for deo operon, tsx, nupG<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
!align=left |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:deoR|deoR]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:deoR|deoR]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left {{table_heading_style}} |Regulation/Activity
!align=left |Regulation/Activity
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Revision as of 00:36, 9 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

deoR

Gene Synonym(s)

ECK0830, b0840, JW0824, nucR[1]

Product Desc.

DeoR transcriptional repressor[2][3]

Repressor for deo operon, nupG and tsx; binds deoxyribose-5-phosphate inducer[4]

Product Synonyms(s)

DNA-binding transcriptional repressor[1], B0840[2][1], NucR[2][1], DeoR[2][1], transcriptional repressor for deo operon, tsx, nupG[2][1]

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): deoR[2]

Regulation/Activity


edit table

See Help:Quickview for help with entering information in the Quickview table.


Notes

[back to top]



The deoR gene is found immediately upstream of the operon. DeoR encodes a repressor protein that negatively regulates the expression of the operon at the level of transcription. A deoR-deficient mutant has a high level of deoxyriboaldolase and pyrimidine nucleoside phosphorylase. [5] In deoR mutations, the repressor is absent and the colonies of the mutants grow more rapidly (Munch-Peterson, et al, Eur. J. Biochem 27: 208-215 (1972)).



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  5. ↑ Zeng, X & Saxild, HH (1999) Identification and characterization of a DeoR-specific operator sequence essential for induction of dra-nupC-pdp operon expression in Bacillus subtilis. J. Bacteriol. 181 1719-27 PubMed
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