cydA:Quickview: Difference between revisions
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{| | {| id="N49aee2cb240c1" class=" tableEdit New_Quickview_Table" | ||
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!align=left | !align=left |Standard Name | ||
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''cydA'' | ''cydA'' | ||
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!align=left | !align=left |Gene Synonym(s) | ||
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''ECK0721, b0733, JW0722, cyd-1''<ref name='LIB:Riley_2006'/> | ''ECK0721, b0733, JW0722, cyd-1''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left |Product Desc. | ||
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cytochrome <i>bd</i>-I terminal oxidase subunit I<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | cytochrome <i>bd</i>-I terminal oxidase subunit I<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | ||
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Cytochrome d (bd-I) terminal oxidase subunit I; upregulated in biofilms and microaerobic conditions; aerobically repressed by H-NS; anaerobically repressed by Fnr<ref name='LIB:EcoGene'/> | Cytochrome d (bd-I) terminal oxidase subunit I; upregulated in biofilms and microaerobic conditions; aerobically repressed by H-NS; anaerobically repressed by Fnr<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left |Product Synonyms(s) | ||
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cytochrome d terminal oxidase, subunit I<ref name='LIB:Riley_2006'/>, B0733<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CydA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | cytochrome d terminal oxidase, subunit I<ref name='LIB:Riley_2006'/>, B0733<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CydA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left |Knock-Out Phenotype | ||
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!align=left | !align=left |Regulation/Expression | ||
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transcription unit(s): [[:Category:Txn_unit:cydAB|cydAB]]<ref name='LIB:EcoCyc10.6'/>, OP00140 | transcription unit(s): [[:Category:Txn_unit:cydAB|cydAB]]<ref name='LIB:EcoCyc10.6'/>, OP00140 | ||
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!align=left | !align=left |Regulation/Activity | ||
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Revision as of 00:29, 9 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
cydA |
|---|---|
| Gene Synonym(s) |
ECK0721, b0733, JW0722, cyd-1[1] |
| Product Desc. |
cytochrome bd-I terminal oxidase subunit I[2][3]; Component of cytochrome bd-I terminal oxidase[2][3] Cytochrome d (bd-I) terminal oxidase subunit I; upregulated in biofilms and microaerobic conditions; aerobically repressed by H-NS; anaerobically repressed by Fnr[4] |
| Product Synonyms(s) |
cytochrome d terminal oxidase, subunit I[1], B0733[2][1], CydA[2][1] |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity |
|
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
H-NS, Fnr and ArcA regulons. ArcA-P antagonizes H-NS repression of cydAB in response to limiting oxygen. Biofilm microarray result was validated with RT-PCR. HT_Cmplx29_Mem: AppC+CydA.[4]
References
- ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.