apbE:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Standard Name
!align=left |Standard Name
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''apbE''  
''apbE''  
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left |Gene Synonym(s)
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''yojL, ECK2206, b2214, JW5368, yojK''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
''yojL, ECK2206, b2214, JW5368, yojK''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
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!align=left {{table_heading_style}} |Product Desc.
!align=left |Product Desc.
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predicted thiamine biosynthesis lipoprotein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
predicted thiamine biosynthesis lipoprotein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
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Lipoprotein involved in thiamine synthesis; primarily characterized in Salmonella<ref name='LIB:EcoGene'/>
Lipoprotein involved in thiamine synthesis; primarily characterized in Salmonella<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left |Product Synonyms(s)
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predicted thiamine biosynthesis lipoprotein<ref name='LIB:Riley_2006'/>, B2214<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YojK<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YojL<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ApbE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
predicted thiamine biosynthesis lipoprotein<ref name='LIB:Riley_2006'/>, B2214<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YojK<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YojL<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ApbE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
!align=left |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:yojL|yojL]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:yojL|yojL]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left {{table_heading_style}} |Regulation/Activity
!align=left |Regulation/Activity
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Revision as of 00:01, 9 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

apbE

Gene Synonym(s)

yojL, ECK2206, b2214, JW5368, yojK[1][2]

Product Desc.

predicted thiamine biosynthesis lipoprotein[2][3]

Lipoprotein involved in thiamine synthesis; primarily characterized in Salmonella[4]

Product Synonyms(s)

predicted thiamine biosynthesis lipoprotein[1], B2214[2][1], YojK[2][1], YojL[2][1], ApbE[2][1]

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): yojL[2]

Regulation/Activity


edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


ApbE probably helps convert aminoimidazole ribotide AIR, a purine intermediate, to the 4-amino-5-hydroxymethyl-2-methyl pyrimidine HMP moiety of thiamine. Localized to the inner membrane, periplasmic location, but not membrane anchor, is required for function. First 19 aa are a type II signal peptide.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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