SGD: Difference between revisions
Jump to navigation
Jump to search
No edit summary |
|||
| Line 24: | Line 24: | ||
| | | | ||
|} | |} | ||
=About {{PAGENAME}}= | <protect><!--box uid=63ce1649aab8b3180235b0af7618f667.1737.N4a252949afe5a--> | ||
<!-- | |||
****************************************************************************************** | |||
* | |||
* ** PLEASE DON'T EDIT THIS TABLE DIRECTLY. Use the edit table link under the table. ** | |||
* | |||
****************************************************************************************** --> | |||
{|border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" {{Prettytable}} width='30%' align=right | |||
|- | |||
!align=left {{table heading style}} |Link/URL: | |||
|- | |||
!align=left {{table heading style}} |What: | |||
|- | |||
!align=left {{table heading style}} |Who: | |||
|- | |||
!align=left {{table heading style}} |Updates: | |||
|- | |||
!align=left {{table heading style}} |Upcoming events: | |||
|- | |||
!align=left {{table heading style}} |Web Services: | |||
|-class='sortbottom' | |||
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.1737.N4a252949afe5a&page=1737&pagename={{FULLPAGENAMEE}}&type=1&template=Database_table edit table] | |||
|} | |||
<!--box uid=63ce1649aab8b3180235b0af7618f667.1737.N4a252949afe5a--></protect> | |||
==About {{PAGENAME}}== | |||
SGD houses genetic and biological info about ''S. cerevisiae''. It is the main genome database for ''Sacchromyces''. | SGD houses genetic and biological info about ''S. cerevisiae''. It is the main genome database for ''Sacchromyces''. | ||
=Content= | ==Content== | ||
Sequences of yeast genes and proteins | Sequences of yeast genes and proteins | ||
| Line 40: | Line 68: | ||
:*tools for analysis and comparison of sequences | :*tools for analysis and comparison of sequences | ||
=Using {{PAGENAME}}= | ==Using {{PAGENAME}}== | ||
==Browsing== | ===Browsing=== | ||
==Searching== | ===Searching=== | ||
Basic Searches: | Basic Searches: | ||
:* gene name, product, or description | :* gene name, product, or description | ||
| Line 67: | Line 95: | ||
:* results of a large-scale expression | :* results of a large-scale expression | ||
==Usage examples== | ===Usage examples=== | ||
''Add links to additional pages describing success stories here.'' | ''Add links to additional pages describing success stories here.'' | ||
=Other sites with related content= | ==Other sites with related content== | ||
=Technology= | ==Technology== | ||
==Web Services/API== | ===Web Services/API=== | ||
=Discussion= | ==Discussion== | ||
=References= | ==References== | ||
{{RefHelp}}<references/> | |||
Cherry JM, Ball C, Weng S, Juvik G, Schmidt R, Adler C, Dunn B, Dwight S, Riles L, Mortimer RK, Botstein D Nature 1997 387(6632 Suppl):67-73 Genetic and physical maps of ''Saccharomyces cerevisiae''. | Cherry JM, Ball C, Weng S, Juvik G, Schmidt R, Adler C, Dunn B, Dwight S, Riles L, Mortimer RK, Botstein D Nature 1997 387(6632 Suppl):67-73 Genetic and physical maps of ''Saccharomyces cerevisiae''. | ||
=External Links= | ==External Links== | ||
[http://yeastgenome.org/ {{PAGENAME}}] | [http://yeastgenome.org/ {{PAGENAME}}] | ||
==Discussion of {{PAGENAME}} on other websites== | ===Discussion of {{PAGENAME}} on other websites=== | ||
Revision as of 13:29, 2 June 2009
You can help EcoliWiki by editing the content of this page. For information about becoming a registered user and obtaining editing privileges, see Help:Accounts.
| SGD | |
| Who: | Mike Cherry, Stanford Univ. |
| What: | Comprehensive data resource for S. cerevisiae (baker's yeast) |
| Where: | SGD |
| Updates | |
| Upcoming events | |
| Web Services | |
| Link/URL: |
|---|
| What: |
| Who: |
| Updates: |
| Upcoming events: |
| Web Services: |
| edit table |
About SGD
SGD houses genetic and biological info about S. cerevisiae. It is the main genome database for Sacchromyces.
Content
Sequences of yeast genes and proteins
Descriptions and classifications of:
- biological roles
- molecular functions
- subcellular localizations
Links to:
- literature information
- functional genomics datasets
- tools for analysis and comparison of sequences
Using SGD
Browsing
Searching
Basic Searches:
- gene name, product, or description
- name of protein or protein complex
- GO terms
- GO IDs
- colleagues or authors
- biochemical pathways
- Pubmed ID
- gene summary paragraphs
- abstracts
- name descriptions
- phenotypes
- locus history notes
Advanced Searches:
- chromosomal feature (ORF, ARS, centromere, etc.)
- protein properties
- phenotypic properties
- interaction properties
- biological process
- molecular function
- cellular component
- results of a large-scale expression
Usage examples
Add links to additional pages describing success stories here.
Technology
Web Services/API
Discussion
References
See Help:References for how to manage references in EcoliWiki. Cherry JM, Ball C, Weng S, Juvik G, Schmidt R, Adler C, Dunn B, Dwight S, Riles L, Mortimer RK, Botstein D Nature 1997 387(6632 Suppl):67-73 Genetic and physical maps of Saccharomyces cerevisiae.