lysA:Evolution: Difference between revisions

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!Organism!!Homologs (Statistics)!!Comments
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''Anopheles gambiae''   
''Anopheles gambiae''   
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''Arabidopsis thaliana''   
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''Ciona intestinalis''   
''Ciona intestinalis''   
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''Dictyostelium discoideum''   
''Dictyostelium discoideum''   
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''Drosophila melanogaster''   
''Drosophila melanogaster''   
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''Monodelphis domestica''   
''Monodelphis domestica''   
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''Mus musculus''   
''Mus musculus''   
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''Oryza gramene''   
''Oryza gramene''   
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''Rattus norvegicus''   
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''Saccharomyces cerevisiae''   
''Saccharomyces cerevisiae''   
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''Schizosaccharomyces pombe''   
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''Takifugu rubripes''   
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''Xenopus tropicalis''   
''Xenopus tropicalis''   
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''Shigella flexneri''   
''Shigella flexneri''   
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===Do-It-Yourself Web Tools===
===Do-It-Yourself Web Tools===
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!Database!!Accession!!Notes
!|Database!!Accession!!Notes
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF02784 PFAM:PF02784]
[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF02784 PFAM:PF02784]
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<protect><!--Families_notes--></protect>
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===Notes===
===Notes===
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{{Links_help}}
 


==References==
==References==
{{BacktoTop}}
{{BacktoTop}}
{{RefHelp}}
 
<references/>
<references/>
<noinclude>
<noinclude>

Revision as of 08:31, 6 February 2009

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000008816 (score: 1.000; bootstrap: 100%)
  • ENSANGP00000009019 (score: 0.426)
  • ENSANGP00000020224 (score: 0.423)
  • ENSANGP00000008815 (score: 0.317)
  • ENSANGP00000020301 (score: 0.171)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT3G14390 (score: 1.000; bootstrap: 100%)
  • AT5G11880 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00038323 (score: 1.000; bootstrap: 100%)
  • WBGene00033029 (score: 0.106)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00003844 (score: 1.000; bootstrap: 100%)
  • WBGene00018764 (score: 0.107)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000007432 (score: 1.000; bootstrap: 100%)
  • ENSCINP00000008768 (score: 0.181)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0190621 (score: 1.000; bootstrap: 77%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0013307 (score: 1.000; bootstrap: 100%)
  • FBgn0013308 (score: 0.727)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000021660 (score: 1.000; bootstrap: 100%)
  • ENSMODP00000018485 (score: 0.511)
  • ENSMODP00000007263 (score: 0.358)

From Inparanoid:20070104

Mus musculus

  • MGI:1859169 (score: 1.000; bootstrap: 100%)
  • MGI:97402 (score: 0.437)
  • MGI:2442093 (score: 0.363)

From Inparanoid:20070104

Oryza gramene

  • Q6ZG77 (score: 1.000; bootstrap: 96%)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000031505 (score: 1.000; bootstrap: 100%)
  • ENSRNOP00000007259 (score: 0.421)
  • ENSRNOP00000007999 (score: 0.316)
  • ENSRNOP00000045880 (score: 0.194)
  • ENSRNOP00000049464 (score: 0.169)
  • ENSRNOP00000039827 (score: 0.131)
  • ENSRNOP00000043900 (score: 0.124)
  • ENSRNOP00000037115 (score: 0.083)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YKL184W (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPAC1444c (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000156319 (score: 1.000; bootstrap: 100%)
  • NEWSINFRUP00000137759 (score: 0.389)
  • NEWSINFRUP00000147907 (score: 0.277)
  • NEWSINFRUP00000147578 (score: 0.219)
  • NEWSINFRUP00000168901 (score: 0.177)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000020790 (score: 1.000; bootstrap: 97%)

From Inparanoid:20070104

Shigella flexneri

LYSA

From SHIGELLACYC

E. coli O157

LYSA

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

PFAM (EcoliWiki Page)

PFAM:PF02784


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Notes

Links

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Name URL Comments
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References

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Categories

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