lrhA:Expression: Difference between revisions

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===Notes===
===Notes===
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<big>'''Expression Studies'''</big>
<big>'''Expression Studies'''</big>
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microarray
microarray
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|[[PMID:12123461]]<ref name=PMID:12123461/>
[[PMID:12123461]]<ref name=PMID:12123461/>
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Microarray study in MG1655 and MG1655 lrhA-.  
Microarray study in MG1655 and MG1655 lrhA-.  
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<big>'''Expression Resources'''</big>
<big>'''Expression Resources'''</big>
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Reporter
Reporter
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lrhA'-'lacZ
lrhA'-'lacZ
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|[[PMID:12123461]]<ref name=PMID:12123461/>
[[PMID:12123461]]<ref name=PMID:12123461/>
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<protect><!--Expression_experimental_notes--></protect>
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===Notes===
===Notes===
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!Database!!Accession!!Notes
!|Database!!Accession!!Notes
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[http://ecocyc.org EcoCyc] ([[EcoCyc|EcoliWiki Page]])  
[http://ecocyc.org EcoCyc] ([[EcoCyc|EcoliWiki Page]])  
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[http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG12123 EcoCyc:EG12123]
[http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG12123 EcoCyc:EG12123]
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[http://www.ecoli-york.org EchoBASE] ([[EchoBASE|EcoliWiki Page]])  
[http://www.ecoli-york.org EchoBASE] ([[EchoBASE|EcoliWiki Page]])  
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[http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB2044 EchoBASE:EB2044]
[http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB2044 EchoBASE:EB2044]
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[http://chase.ou.edu/oubcf/index.php EcoliGenExpDB] ([[EcoliGenExpDB|EcoliWiki Page]])  
[http://chase.ou.edu/oubcf/index.php EcoliGenExpDB] ([[EcoliGenExpDB|EcoliWiki Page]])  
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[http://genexpdb.ou.edu/index.php?query=b2289 GenExpDB:b2289]
[http://chase.ou.edu/macro/searchlink.php?bnum=b2289 EcoliGenExpDB:b2289]
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[http://ecogene.org EcoGene] ([[EcoGene|EcoliWiki Page]])  
[http://ecogene.org EcoGene] ([[EcoGene|EcoliWiki Page]])  
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[http://ecogene.org/geneinfo.php?eg_id=EG12123 EcoGene:EG12123]
[http://ecogene.org/geneinfo.php?eg_id=EG12123 EcoGene:EG12123]
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<protect><!--Accessions_notes--></protect>
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===Notes===
===Notes===
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==References==
==References==
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<references/>
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__NOTOC__
__NOTOC__

Revision as of 06:48, 6 February 2009

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Overview Transcription Translation Turnover Experimental Links References Suggestions

Overview

This is a placeholder for a summary statement on how expression of this gene product is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.

Transcription and Transcriptional Regulation

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See Help:Expression_transcription for help entering or editing information in this section of EcoliWiki.

Transcription unit(s)

lrhA

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Figure courtesy of RegulonDB


Notes

This is a placeholder for a summary statement about how transcription of this gene is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.

Translation and Regulation of Translation

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gbrowse_img.php?coord=2404643..2404683&genome=ecoli&name=MG1655&trackset=Genes_unlabeled+DNA_unlabeled+flip&width=400&.png
This picture shows the sequence around the N-terminus.

Notes

This is a placeholder for a summary statement about how translation of this gene product is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.

Turnover and Regulation of Turnover

</protect>

Notes

This is a placeholder for a summary statement about turnover of this gene product. You can help EcoliWiki by becoming a user and writing/editing this statement.

Experimental

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Mutations Affecting Expression See Help:Expression_mutations for help entering or editing information in this section of EcoliWiki.

Allele Name Mutation Phenotype Reference
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Expression Studies See Help:Expression_studies for help entering or editing information in this section of EcoliWiki.

Type Reference Notes

microarray

GenExpDB:b2289 (EcoliWiki Page)

Summary of data for lrhA from multiple microarray studies

microarray

PMID:12123461[1]

Microarray study in MG1655 and MG1655 lrhA-.

microarray

GEO Profiles:b2289 (EcoliWiki Page)

NCBI GEO profiles for lrhA

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Expression Resources See Help:Expression_resources for help entering or editing information in this section of EcoliWiki.

Resource Name Resource Type Description Source Notes

Reporter

lrhA'-'lacZ

PMID:12123461[1]


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<protect>

Notes

Accessions Related to lrhA Expression

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

EcoCyc (EcoliWiki Page)

EcoCyc:EG12123

EchoBASE (EcoliWiki Page)

EchoBASE:EB2044

EcoliGenExpDB (EcoliWiki Page)

EcoliGenExpDB:b2289

EcoGene (EcoliWiki Page)

EcoGene:EG12123


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Notes

Links

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Name URL Comments
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References

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  1. ↑ 1.0 1.1 Lehnen, D et al. (2002) LrhA as a new transcriptional key regulator of flagella, motility and chemotaxis genes in Escherichia coli. Mol. Microbiol. 45 521-32 PubMed


Categories

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