rplN:Evolution: Difference between revisions

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!Organism!!Homologs (Statistics)!!Comments
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''Anopheles gambiae''   
''Anopheles gambiae''   
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''Arabidopsis thaliana''   
''Arabidopsis thaliana''   
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''Bos taurus''   
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''Caenorhabditis briggsae''   
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''Caenorhabditis elegans''   
''Caenorhabditis elegans''   
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''Canis familiaris''   
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''Ciona intestinalis''   
''Ciona intestinalis''   
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''Danio rerio''   
''Danio rerio''   
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''Dictyostelium discoideum''   
''Dictyostelium discoideum''   
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''Drosophila melanogaster''   
''Drosophila melanogaster''   
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''Drosophila pseudoobscura''   
''Drosophila pseudoobscura''   
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''Gallus gallus''   
''Gallus gallus''   
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''Homo sapiens''   
''Homo sapiens''   
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''Mus musculus''   
''Mus musculus''   
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''Oryza gramene''   
''Oryza gramene''   
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''Pan troglodytes''   
''Pan troglodytes''   
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''Rattus norvegicus''   
''Rattus norvegicus''   
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''Saccharomyces cerevisiae''   
''Saccharomyces cerevisiae''   
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''Schizosaccharomyces pombe''   
''Schizosaccharomyces pombe''   
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''Takifugu rubripes''   
''Takifugu rubripes''   
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''Tetraodon nigroviridis''   
''Tetraodon nigroviridis''   
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''Xenopus tropicalis''   
''Xenopus tropicalis''   
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''Shigella flexneri''   
''Shigella flexneri''   
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''E. coli'' O157  
''E. coli'' O157  
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===Do-It-Yourself Web Tools===
===Do-It-Yourself Web Tools===
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!Database!!Accession!!Notes
!|Database!!Accession!!Notes
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF00238 PFAM:PF00238]
[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF00238 PFAM:PF00238]
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<protect><!--Families_notes--></protect>
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===Notes===
===Notes===
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==References==
==References==
{{BacktoTop}}
{{BacktoTop}}
{{RefHelp}}
 
<references/>
<references/>
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Revision as of 21:57, 21 January 2009

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

[back to top]


See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000014430 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000012613 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT5G46160 (score: 1.000; bootstrap: 99%)
  • AT1G17560 (score: 0.455)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000004190 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000013834 (score: 0.788)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00030677 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00004435 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000024349 (score: 1.000; bootstrap: 100%)
  • ENSCAFP00000015448 (score: 0.387)
  • ENSCAFP00000012543 (score: 0.137)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000006537 (score: 1.000; bootstrap: 100%)
  • ENSCINP00000001178 (score: 0.336)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-030131-8756 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040425-1041 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0201610 (score: 1.000; bootstrap: 80%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0010078 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA17595-PA (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000002493 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000346039 (score: 1.000; bootstrap: 100%)
  • ENSP00000272885 (score: 0.613)
  • ENSP00000350108 (score: 0.363)

From Inparanoid:20070104

Mus musculus

  • MGI:1929455 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Oryza gramene

  • Q6QY49 (score: 1.000; bootstrap: 68%)
  • P12137 (score: 1.000; bootstrap: 68%)
  • Q6END7 (score: 1.000; bootstrap: 70%)
  • Q6ENS7 (score: 1.000; bootstrap: 70%)
  • Q6L3G2 (score: 1.000; bootstrap: 70%)
  • Q7F4T2 (score: 1.000; bootstrap: 70%)
  • Q8LID9 (score: 0.991)
  • P08529 (score: 0.972)
  • Q69NK5 (score: 0.963)
  • Q95H51 (score: 0.954)
  • Q6AUK3 (score: 0.945)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000015471 (score: 1.000; bootstrap: 100%)
  • ENSPTRP00000022159 (score: 0.613)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000005471 (score: 1.000; bootstrap: 100%)
  • ENSRNOP00000034140 (score: 0.703)
  • ENSRNOP00000030059 (score: 0.594)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YKL170W (score: 1.000; bootstrap: 86%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPBC8877 (score: 1.000; bootstrap: 96%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000152919 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00026166001 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000051170 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

RPLN

From SHIGELLACYC

E. coli O157

RPLN

From ECOO157CYC

edit table


Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

PFAM (EcoliWiki Page)

PFAM:PF00238


edit table


Notes

Links

[back to top]


Name URL Comments
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References

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Categories

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