rplN:Evolution

From EcoliWiki
Jump to: navigation, search

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

[back to top]


See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000014430 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000012613 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT5G46160 (score: 1.000; bootstrap: 99%)
  • AT1G17560 (score: 0.455)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000004190 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000013834 (score: 0.788)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00030677 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00004435 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000024349 (score: 1.000; bootstrap: 100%)
  • ENSCAFP00000015448 (score: 0.387)
  • ENSCAFP00000012543 (score: 0.137)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000006537 (score: 1.000; bootstrap: 100%)
  • ENSCINP00000001178 (score: 0.336)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-030131-8756 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040425-1041 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0201610 (score: 1.000; bootstrap: 80%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0010078 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA17595-PA (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000002493 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000346039 (score: 1.000; bootstrap: 100%)
  • ENSP00000272885 (score: 0.613)
  • ENSP00000350108 (score: 0.363)

From Inparanoid:20070104

Mus musculus

  • MGI:1929455 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Oryza gramene

  • Q6QY49 (score: 1.000; bootstrap: 68%)
  • P12137 (score: 1.000; bootstrap: 68%)
  • Q6END7 (score: 1.000; bootstrap: 70%)
  • Q6ENS7 (score: 1.000; bootstrap: 70%)
  • Q6L3G2 (score: 1.000; bootstrap: 70%)
  • Q7F4T2 (score: 1.000; bootstrap: 70%)
  • Q8LID9 (score: 0.991)
  • P08529 (score: 0.972)
  • Q69NK5 (score: 0.963)
  • Q95H51 (score: 0.954)
  • Q6AUK3 (score: 0.945)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000015471 (score: 1.000; bootstrap: 100%)
  • ENSPTRP00000022159 (score: 0.613)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000005471 (score: 1.000; bootstrap: 100%)
  • ENSRNOP00000034140 (score: 0.703)
  • ENSRNOP00000030059 (score: 0.594)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YKL170W (score: 1.000; bootstrap: 86%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPBC8877 (score: 1.000; bootstrap: 96%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000152919 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00026166001 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000051170 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

RPLN

From SHIGELLACYC

E. coli O157

RPLN

From ECOO157CYC


Do-It-Yourself Web Tools

<protect></protect>

Notes

Families

[back to top]


See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Superfamily (EcoliWiki Page)

SUPERFAMILY:50193

Panther (EcoliWiki Page)

PTHR11761:SF3

Pfam (EcoliWiki Page)

PF00238 Ribosomal protein L14p/L23e

EcoCyc

EcoCyc:EG10875

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10875

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000866

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0868

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0010837

Escherichia coli str. K-12 substr. MG1655

<protect></protect>

Notes

Links

[back to top]



References

[back to top]


See Help:References for how to manage references in EcoliWiki.


Categories

[back to top]