nrdB:Evolution: Difference between revisions

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!Organism!!Homologs (Statistics)!!Comments
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''Anopheles gambiae''   
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''Apis mellifera''   
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''Arabidopsis thaliana''   
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''Caenorhabditis elegans''   
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''Canis familiaris''   
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''Ciona intestinalis''   
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''Danio rerio''   
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''Dictyostelium discoideum''   
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''Drosophila melanogaster''   
''Drosophila melanogaster''   
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''Gallus gallus''   
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''Macaca mulatta''   
''Macaca mulatta''   
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''Monodelphis domestica''   
''Monodelphis domestica''   
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''Mus musculus''   
''Mus musculus''   
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''Oryza gramene''   
''Oryza gramene''   
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''Pan troglodytes''   
''Pan troglodytes''   
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''Rattus norvegicus''   
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''Takifugu rubripes''   
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''Shigella flexneri''   
''Shigella flexneri''   
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===Do-It-Yourself Web Tools===
===Do-It-Yourself Web Tools===
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!Database!!Accession!!Notes
!|Database!!Accession!!Notes
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF00268 PFAM:PF00268]
[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF00268 PFAM:PF00268]
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===Notes===
===Notes===
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==References==
==References==
{{BacktoTop}}
{{BacktoTop}}
{{RefHelp}}
 
<references/>
<references/>
<noinclude>
<noinclude>

Revision as of 21:52, 21 January 2009

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000023621 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000024612 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT3G23580 (score: 1.000; bootstrap: 100%)
  • AT3G27060 (score: 0.672)
  • AT5G40942 (score: 0.156)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000010802 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000028260 (score: 0.571)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00039246 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00004392 (score: 1.000; bootstrap: 100%)
  • WBGene00017610 (score: 0.321)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000000854 (score: 1.000; bootstrap: 100%)
  • ENSCAFP00000005080 (score: 0.746)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000010349 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Danio rerio

  • ZDB-CDNA-040718-31 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040425-767 (score: 0.997)
  • ZDB-GENE-990415-25 (score: 0.997)
  • ZDB-CDNA-051113-6 (score: 0.647)
  • ZDB-GENE-030616-614 (score: 0.647)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0185062 (score: 1.000; bootstrap: 100%)
  • DDB0217423 (score: 1.000; bootstrap: 100%)
  • DDB0184057 (score: 0.286)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0011704 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA21447-PA (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000025808 (score: 1.000; bootstrap: 100%)
  • ENSGALP00000030966 (score: 0.741)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000251810 (score: 1.000; bootstrap: 100%)
  • ENSP00000302955 (score: 0.744)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000027327 (score: 1.000; bootstrap: 100%)
  • ENSMMUP00000002749 (score: 0.555)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000007415 (score: 1.000; bootstrap: 100%)
  • ENSMODP00000018460 (score: 0.808)

From Inparanoid:20070104

Mus musculus

  • MGI:98181 (score: 1.000; bootstrap: 100%)
  • MGI:2155865 (score: 0.681)
  • MGI:3643040 (score: 0.291)

From Inparanoid:20070104

Oryza gramene

  • Q652F0 (score: 1.000; bootstrap: 100%)
  • Q5VRJ6 (score: 0.951)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000035025 (score: 1.000; bootstrap: 100%)
  • ENSPTRP00000020027 (score: 0.744)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000011163 (score: 1.000; bootstrap: 100%)
  • ENSRNOP00000037227 (score: 0.999)
  • ENSRNOP00000038047 (score: 0.581)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YJL026W (score: 1.000; bootstrap: 100%)
  • YGR180C (score: 0.446)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPBC25D124 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000140270 (score: 1.000; bootstrap: 100%)
  • NEWSINFRUP00000153067 (score: 0.743)
  • NEWSINFRUP00000182012 (score: 0.210)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00012923001 (score: 1.000; bootstrap: 100%)
  • GSTENP00003453001 (score: 0.495)
  • GSTENP00003458001 (score: 0.403)
  • GSTENP00003455001 (score: 0.300)
  • GSTENP00000721001 (score: 0.078)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000007621 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

NRDB

From SHIGELLACYC

E. coli O157

NRDB

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

PFAM (EcoliWiki Page)

PFAM:PF00268


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Notes

Links

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Name URL Comments
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References

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Categories

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