abgB:Evolution: Difference between revisions

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!Organism!!Homologs (Statistics)!!Comments
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''Bos taurus''   
''Bos taurus''   
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''Pan troglodytes''   
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''E. coli'' O157  
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{{Evolution_homologs_table_help}}
===Do-It-Yourself Web Tools===
*[http://130.14.29.110/BLAST/ BLAST]
*[http://130.14.29.110/BLAST/Blast.cgi?CMD=Web&LAYOUT=TwoWindows&AUTO_FORMAT=Semiauto&ALIGNMENTS=250&ALIGNMENT_VIEW=Pairwise&CLIENT=web&COMPOSITION_BASED_STATISTICS=on&DATABASE=nr&CDD_SEARCH=on&DESCRIPTIONS=500&ENTREZ_QUERY=%28none%29&EXPECT=10&FORMAT_OBJECT=Alignment&FORMAT_TYPE=HTML&I_THRESH=0.005&MATRIX_NAME=BLOSUM62&NCBI_GI=on&PAGE=Proteins&PROGRAM=blastp&RUN_PSIBLAST=on&SERVICE=plain&SET_DEFAULTS.x=36&SET_DEFAULTS.y=5&SHOW_OVERVIEW=on&END_OF_HTTPGET=Yes&SHOW_LINKOUT=yes&GET_SEQUENCE=yes&SEARCH_NAME=psi_bp/ CDD]
*[http://inparanoid.sbc.su.se/cgi-bin/gene_search.cgi?id=NP_415853&idtype=all&all_or_selection=all&specieslist=1&scorelimit=0.05&.submit=Submit&.cgifields=specieslist&.cgifields=idtype&.cgifields=all_or_selection InParanoid]
*[http://www.sanger.ac.uk/PostGenomics/S_pombe/YOGY/ YOGY]


<protect><!--Homology_notes--></protect>
===Notes===
==Families==
{{BacktoTop}}
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{|class = 'sortable' {{Prettytable}} id='209213'
|- {{table heading style}}
!Organism!!Homologs (Statistics)!!Comments
|-
|
''Bos taurus'' 
|
* ENSBTAP00000015493 (score: 1.000; bootstrap: 100%)
|
From Inparanoid:20070104
|-
|
''Canis familiaris'' 
|
* ENSCAFP00000004605 (score: 1.000; bootstrap: 100%)
|
From Inparanoid:20070104
|-
|
''Gallus gallus'' 
|
* ENSGALP00000025400 (score: 1.000; bootstrap: 100%)
|
From Inparanoid:20070104
|-
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''Homo sapiens'' 
|
* ENSP00000275072 (score: 1.000; bootstrap: 100%)
|
From Inparanoid:20070104
|-
|
''Macaca mulatta'' 
|
* ENSMMUP00000019599 (score: 1.000; bootstrap: 100%)
|
From Inparanoid:20070104
|-
|
''Monodelphis domestica'' 
|
* ENSMODP00000022796 (score: 1.000; bootstrap: 100%)
|
From Inparanoid:20070104
|-
|
''Mus musculus'' 
|
* MGI:2685270 (score: 1.000; bootstrap: 100%)
|
From Inparanoid:20070104
|-
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''Pan troglodytes'' 
|
* ENSPTRP00000031460 (score: 1.000; bootstrap: 100%)
|
From Inparanoid:20070104
|-
|
''Rattus norvegicus'' 
|
* ENSRNOP00000010225 (score: 1.000; bootstrap: 100%)
|
From Inparanoid:20070104
|-
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''Takifugu rubripes'' 
|
* NEWSINFRUP00000157185 (score: 1.000; bootstrap: 100%)
* NEWSINFRUP00000134016 (score: 0.492)
|
From Inparanoid:20070104
|-
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''Tetraodon nigroviridis'' 
|
* GSTENP00032133001 (score: 1.000; bootstrap: 100%)
* GSTENP00035518001 (score: 0.535)
|
From Inparanoid:20070104
|-
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''Xenopus tropicalis'' 
|
* ENSXETP00000019517 (score: 1.000; bootstrap: 100%)
|
From Inparanoid:20070104
|-
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''E. coli'' O157
|
Z2427
|
From ECOO157CYC
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{{Evolution_families_table_help}}
<protect><!--Families_notes--></protect>
<protect><!--Families_notes--></protect>
===Notes===
===Notes===
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{{Links_help}}
 


==References==
==References==
{{BacktoTop}}
{{BacktoTop}}
{{RefHelp}}
 
<references/>
<references/>
<noinclude>
<noinclude>

Revision as of 21:48, 21 January 2009

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Bos taurus

  • ENSBTAP00000015493 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000004605 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000025400 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000275072 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000019599 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000022796 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Mus musculus

  • MGI:2685270 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000031460 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000010225 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000157185 (score: 1.000; bootstrap: 100%)
  • NEWSINFRUP00000134016 (score: 0.492)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00032133001 (score: 1.000; bootstrap: 100%)
  • GSTENP00035518001 (score: 0.535)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000019517 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

E. coli O157

Z2427

From ECOO157CYC

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Notes

Links

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Name URL Comments
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References

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Categories

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