grxD:Evolution: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
imported>WikiEntryBot
Automated import of articles
 
imported>WikiEntryBot
Automated import of articles
Line 1: Line 1:
<!--PLEASE EDIT FROM THE SECTION OR TABLE EDIT LINKS...IF YOU SEE THIS MESSAGE, YOU'RE PROBABLY IN THE WRONG PLACE-->
<!--
***************************************************************************************************************************************************
*
*
*              PLEASE EDIT FROM THE SECTION OR TABLE EDIT LINKS...IF YOU SEE THIS MESSAGE,
*                            YOU'RE PROBABLY IN THE WRONG PLACE
*
*
***************************************************************************************************************************************************
-->{{#css:Suppresslinks.css}}<css>{{:Suppresslinks.css}}</css>
<noinclude>{{TabsTop}}
<noinclude>{{TabsTop}}
{{Tab|Quickview|grxD}}{{Tab|Gene|grxD}}{{Tab|Gene Product(s)|grxD}}{{Tab|Expression|grxD}}{{Tab On|Evolution|grxD}}{{Tab|On One Page|grxD}}{{TabsBottom}}
{{Tab|Quickview|grxD}}{{Tab|Gene|grxD}}{{Tab|Gene Product(s)|grxD}}{{Tab|Expression|grxD}}{{Tab On|Evolution|grxD}}{{Tab|On One Page|grxD}}{{TabsBottom}}
Line 12: Line 21:
</noinclude>
</noinclude>
==Homologs in Other Organisms==
==Homologs in Other Organisms==
<!--box uid=421aa90e079fa326b6494f812ad13e79..S46a079236ea18-->
{{BacktoTop}}
<!--box uid=421aa90e079fa326b6494f812ad13e79.47285.V46abc52f6d66a-->
<!--*** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ***  -->
<!--*** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ***  -->
{|class = 'sortable' {{Prettytable}} id='89063'  
{|class = 'sortable' {{Prettytable}} id='209737'  
|- {{table heading style}}
|- {{table heading style}}
!Organism!!Homologs (Statistics)!!Comments
!Organism!!Homologs (Statistics)!!Comments
Line 206: Line 216:
From SHIGELLACYC  
From SHIGELLACYC  
|-class='sortbottom'
|-class='sortbottom'
|[{{SERVER}}/colipedia/index.php/Special:TableEdit?id=421aa90e079fa326b6494f812ad13e79..S46a079236ea18&page=&pagename={{FULLPAGENAMEE}} edit table] || ||
|[{{SERVER}}/colipedia/index.php/Special:TableEdit?id=421aa90e079fa326b6494f812ad13e79.47285.V46abc52f6d66a&page=47285&pagename={{FULLPAGENAMEE}} edit table] || ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79..S46a079236ea18-->
<!--box uid=421aa90e079fa326b6494f812ad13e79.47285.V46abc52f6d66a-->
{{Evolution_homologs_table_help}}
{{Evolution_homologs_table_help}}


Line 222: Line 232:


==Families==
==Families==
<!--box uid=421aa90e079fa326b6494f812ad13e79..S46a079236ea18-->
{{BacktoTop}}
<!--box uid=421aa90e079fa326b6494f812ad13e79.47285.V46abc52f6d66a-->
<!--*** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ***  -->
<!--*** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ***  -->
{|class = 'sortable' {{Prettytable}} id='89063'  
{|class = 'sortable' {{Prettytable}} id='209737'  
|- {{table heading style}}
|- {{table heading style}}
!Organism!!Homologs (Statistics)!!Comments
!Organism!!Homologs (Statistics)!!Comments
Line 423: Line 434:
From ECOO157CYC  
From ECOO157CYC  
|-class='sortbottom'
|-class='sortbottom'
|[{{SERVER}}/colipedia/index.php/Special:TableEdit?id=421aa90e079fa326b6494f812ad13e79..S46a079236ea18&page=&pagename={{FULLPAGENAMEE}} edit table] || ||
|[{{SERVER}}/colipedia/index.php/Special:TableEdit?id=421aa90e079fa326b6494f812ad13e79.47285.V46abc52f6d66a&page=47285&pagename={{FULLPAGENAMEE}} edit table] || ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79..S46a079236ea18-->
<!--box uid=421aa90e079fa326b6494f812ad13e79.47285.V46abc52f6d66a-->
{{Evolution_families_table_help}}
{{Evolution_families_table_help}}
<protect><!--Families_notes--></protect>
<protect><!--Families_notes--></protect>
Line 432: Line 443:


==Links==
==Links==
{{Evolution_links_default}}
{{BacktoTop}}
<!--box uid=421aa90e079fa326b6494f812ad13e79.47285.I46a80e4f89b5b-->
<!--*** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ***  -->
{|class = 'sortable' {{Prettytable}} id='111323'
|- {{table_heading_style}}
!Name!!URL!!Comments
|-class='sortbottom'
|[{{SERVER}}/colipedia/index.php/Special:TableEdit?id=421aa90e079fa326b6494f812ad13e79.47285.I46a80e4f89b5b&page=47285&pagename={{FULLPAGENAMEE}} edit table] || ||
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79.47285.I46a80e4f89b5b-->
{{Links_help}}
 
==References==
==References==
{{BacktoTop}}
{{RefHelp}}
{{RefHelp}}
<references/>
<references/>

Revision as of 22:38, 28 July 2007

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

[back to top]


Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000022155 (score: 1.000; bootstrap: 100%)
  • ENSANGP00000015021 (score: 0.087)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000026693 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT4G04950 (score: 1.000; bootstrap: 56%)
  • AT4G32580 (score: 0.217)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000017860 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000038450 (score: 0.285)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00040544 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00017062 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000019565 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000003944 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-041010-22 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-041010-22 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0203208 (score: 1.000; bootstrap: 66%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0030584 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA12959-PA (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000018029 (score: 1.000; bootstrap: 77%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000328570 (score: 1.000; bootstrap: 68%)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000022473 (score: 1.000; bootstrap: 83%)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000015835 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Mus musculus

  • MGI:1920296 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Oryza gramene

  • Q5JM41 (score: 1.000; bootstrap: 52%)
  • Q5VR05 (score: 1.000; bootstrap: 51%)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000011409 (score: 1.000; bootstrap: 92%)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000005781 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YPL059W (score: 1.000; bootstrap: 70%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPAPB2B42 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000145294 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00021940001 (score: 1.000; bootstrap: 77%)
  • GSTENP00011267001 (score: 0.279)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000024680 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

YDHD

From SHIGELLACYC

edit table

See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Do-It-Yourself Web Tools


Notes

Families

[back to top]


Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000022155 (score: 1.000; bootstrap: 100%)
  • ENSANGP00000015021 (score: 0.087)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000026693 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT4G04950 (score: 1.000; bootstrap: 56%)
  • AT4G32580 (score: 0.217)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000017860 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000038450 (score: 0.285)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00040544 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00017062 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000019565 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000003944 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-041010-22 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-041010-22 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0203208 (score: 1.000; bootstrap: 66%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0030584 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA12959-PA (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000018029 (score: 1.000; bootstrap: 77%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000328570 (score: 1.000; bootstrap: 68%)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000022473 (score: 1.000; bootstrap: 83%)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000015835 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Mus musculus

  • MGI:1920296 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Oryza gramene

  • Q5JM41 (score: 1.000; bootstrap: 52%)
  • Q5VR05 (score: 1.000; bootstrap: 51%)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000011409 (score: 1.000; bootstrap: 92%)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000005781 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YPL059W (score: 1.000; bootstrap: 70%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPAPB2B42 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000145294 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00021940001 (score: 1.000; bootstrap: 77%)
  • GSTENP00011267001 (score: 0.279)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000024680 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

YDHD

From SHIGELLACYC

E. coli O157

YDHD

From ECOO157CYC

edit table

See Help:Evolution_families for help entering or editing information in this section of EcoliWiki.

Notes

Links

[back to top]


Name URL Comments
edit table

See Help:Links_table for how to enter or edit information in this section of EcoliWiki.

References

[back to top]


See Help:References for how to manage references in EcoliWiki.