icd:Evolution: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
Newer edit →
imported>WikiEntryBot
Automated import of articles
 
imported>WikiEntryBot
Automated import of articles
Line 1: Line 1:
<!--PLEASE EDIT FROM THE SECTION OR TABLE EDIT LINKS...IF YOU SEE THIS MESSAGE, YOU'RE PROBABLY IN THE WRONG PLACE-->
<!--
***************************************************************************************************************************************************
*
*
*              PLEASE EDIT FROM THE SECTION OR TABLE EDIT LINKS...IF YOU SEE THIS MESSAGE,
*                            YOU'RE PROBABLY IN THE WRONG PLACE
*
*
***************************************************************************************************************************************************
-->{{#css:Suppresslinks.css}}<css>{{:Suppresslinks.css}}</css>
<noinclude>{{TabsTop}}
<noinclude>{{TabsTop}}
{{Tab|Quickview|icd}}{{Tab|Gene|icd}}{{Tab|Gene Product(s)|icd}}{{Tab|Expression|icd}}{{Tab On|Evolution|icd}}{{Tab|On One Page|icd}}{{TabsBottom}}
{{Tab|Quickview|icd}}{{Tab|Gene|icd}}{{Tab|Gene Product(s)|icd}}{{Tab|Expression|icd}}{{Tab On|Evolution|icd}}{{Tab|On One Page|icd}}{{TabsBottom}}
Line 12: Line 21:
</noinclude>
</noinclude>
==Homologs in Other Organisms==
==Homologs in Other Organisms==
<!--box uid=421aa90e079fa326b6494f812ad13e79..E46a074e70acc4-->
{{BacktoTop}}
<!--box uid=421aa90e079fa326b6494f812ad13e79.46231.W46abb83d5a0be-->
<!--*** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ***  -->
<!--*** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ***  -->
{|class = 'sortable' {{Prettytable}} id='88204'  
{|class = 'sortable' {{Prettytable}} id='208876'  
|- {{table heading style}}
|- {{table heading style}}
!Organism!!Homologs (Statistics)!!Comments
!Organism!!Homologs (Statistics)!!Comments
Line 238: Line 248:
From SHIGELLACYC  
From SHIGELLACYC  
|-class='sortbottom'
|-class='sortbottom'
|[{{SERVER}}/colipedia/index.php/Special:TableEdit?id=421aa90e079fa326b6494f812ad13e79..E46a074e70acc4&page=&pagename={{FULLPAGENAMEE}} edit table] || ||
|[{{SERVER}}/colipedia/index.php/Special:TableEdit?id=421aa90e079fa326b6494f812ad13e79.46231.W46abb83d5a0be&page=46231&pagename={{FULLPAGENAMEE}} edit table] || ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79..E46a074e70acc4-->
<!--box uid=421aa90e079fa326b6494f812ad13e79.46231.W46abb83d5a0be-->
{{Evolution_homologs_table_help}}
{{Evolution_homologs_table_help}}


Line 254: Line 264:


==Families==
==Families==
<!--box uid=421aa90e079fa326b6494f812ad13e79..B46a074f7434a5-->
{{BacktoTop}}
<!--box uid=421aa90e079fa326b6494f812ad13e79.46231.K46abb869380f2-->
<!--*** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ***  -->
<!--*** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ***  -->
{|class = 'sortable' {{Prettytable}} id='88205'  
{|class = 'sortable' {{Prettytable}} id='208877'  
|- {{table_heading_style}}
|- {{table_heading_style}}
!Database!!Accession!!Notes
!Database!!Accession!!Notes
Line 267: Line 278:
   
   
|-class='sortbottom'
|-class='sortbottom'
|[{{SERVER}}/colipedia/index.php/Special:TableEdit?id=421aa90e079fa326b6494f812ad13e79..B46a074f7434a5&page=&pagename={{FULLPAGENAMEE}} edit table] || ||
|[{{SERVER}}/colipedia/index.php/Special:TableEdit?id=421aa90e079fa326b6494f812ad13e79.46231.K46abb869380f2&page=46231&pagename={{FULLPAGENAMEE}} edit table] || ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79..B46a074f7434a5-->
<!--box uid=421aa90e079fa326b6494f812ad13e79.46231.K46abb869380f2-->
{{Evolution_families_table_help}}
{{Evolution_families_table_help}}
<protect><!--Families_notes--></protect>
<protect><!--Families_notes--></protect>
Line 276: Line 287:


==Links==
==Links==
{{Evolution_links_default}}
{{BacktoTop}}
<!--box uid=421aa90e079fa326b6494f812ad13e79.46231.N46a80440d2dca-->
<!--*** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ***  -->
{|class = 'sortable' {{Prettytable}} id='110357'
|- {{table_heading_style}}
!Name!!URL!!Comments
|-class='sortbottom'
|[{{SERVER}}/colipedia/index.php/Special:TableEdit?id=421aa90e079fa326b6494f812ad13e79.46231.N46a80440d2dca&page=46231&pagename={{FULLPAGENAMEE}} edit table] || ||
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79.46231.N46a80440d2dca-->
{{Links_help}}
 
==References==
==References==
{{BacktoTop}}
{{RefHelp}}
{{RefHelp}}
<references/>
<references/>

Revision as of 21:43, 28 July 2007

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

[back to top]


Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000010852 (score: 1.000; bootstrap: 100%)
  • ENSANGP00000010336 (score: 0.188)
  • ENSANGP00000013512 (score: 0.184)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000009539 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT5G03290 (score: 1.000; bootstrap: 100%)
  • AT3G09810 (score: 0.853)
  • AT4G35260 (score: 0.298)
  • AT4G35650 (score: 0.276)
  • AT2G17130 (score: 0.272)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000008177 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000025044 (score: 0.197)
  • ENSBTAP00000030212 (score: 0.139)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00033447 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00009664 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000020880 (score: 1.000; bootstrap: 100%)
  • ENSCAFP00000009923 (score: 0.189)
  • ENSCAFP00000028461 (score: 0.182)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000014956 (score: 1.000; bootstrap: 100%)
  • ENSCINP00000015369 (score: 0.215)
  • ENSCINP00000009119 (score: 0.176)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-040426-1007 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040425-1938 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040425-3548 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040625-252 (score: 0.205)
  • ZDB-GENE-040625-174 (score: 0.205)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0231288 (score: 1.000; bootstrap: 100%)
  • DDB0231294 (score: 0.363)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0027291 (score: 1.000; bootstrap: 100%)
  • FBgn0052026 (score: 0.467)
  • FBgn0038922 (score: 0.182)
  • FBgn0035005 (score: 0.148)
  • FBgn0039358 (score: 0.148)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA11495-PA (score: 1.000; bootstrap: 100%)
  • GA16620-PA (score: 0.500)
  • GA19594-PA (score: 0.212)
  • GA17474-PA (score: 0.175)
  • GA18606-PA (score: 0.169)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000005224 (score: 1.000; bootstrap: 100%)
  • ENSGALP00000023363 (score: 0.052)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000299518 (score: 1.000; bootstrap: 100%)
  • ENSP00000245969 (score: 0.188)
  • ENSP00000217901 (score: 0.184)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000014584 (score: 1.000; bootstrap: 100%)
  • ENSMODP00000010659 (score: 0.179)
  • ENSMODP00000006416 (score: 0.149)

From Inparanoid:20070104

Mus musculus

  • MGI:1915084 (score: 1.000; bootstrap: 100%)
  • MGI:2158650 (score: 0.192)
  • MGI:1099463 (score: 0.181)
  • MGI:2142174 (score: 0.133)

From Inparanoid:20070104

Oryza gramene

  • Q6ZI55 (score: 1.000; bootstrap: 100%)
  • Q7XK23 (score: 0.817)
  • Q5U8V3 (score: 0.563)
  • Q9SDG5 (score: 0.294)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000012542 (score: 1.000; bootstrap: 100%)
  • ENSPTRP00000022566 (score: 0.197)
  • ENSPTRP00000038951 (score: 0.106)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000015102 (score: 1.000; bootstrap: 100%)
  • ENSRNOP00000009681 (score: 0.196)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YOR136W (score: 1.000; bootstrap: 100%)
  • YNL037C (score: 0.198)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPBC9025c (score: 1.000; bootstrap: 100%)
  • SPAC11G73 (score: 0.206)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000129247 (score: 1.000; bootstrap: 100%)
  • NEWSINFRUP00000168718 (score: 0.222)
  • NEWSINFRUP00000161887 (score: 0.198)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00015984001 (score: 1.000; bootstrap: 100%)
  • GSTENP00028116001 (score: 0.175)
  • GSTENP00020960001 (score: 0.166)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000021703 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

ICDA

From SHIGELLACYC

edit table

See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Do-It-Yourself Web Tools


Notes

Families

[back to top]


Database Accession Notes

PFAM (EcoliWiki Page)

PFAM:PF00180

edit table

See Help:Evolution_families for help entering or editing information in this section of EcoliWiki.

Notes

Links

[back to top]


Name URL Comments
edit table

See Help:Links_table for how to enter or edit information in this section of EcoliWiki.

References

[back to top]


See Help:References for how to manage references in EcoliWiki.

Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=icd:Evolution&oldid=197872"