phoA:Evolution: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
Newer edit →
imported>WikiEntryBot
Automated import of articles
 
imported>WikiEntryBot
Automated import of articles
Line 1: Line 1:
<!--PLEASE EDIT FROM THE SECTION OR TABLE EDIT LINKS...IF YOU SEE THIS MESSAGE, YOU'RE PROBABLY IN THE WRONG PLACE-->
<!--
***************************************************************************************************************************************************
*
*
*              PLEASE EDIT FROM THE SECTION OR TABLE EDIT LINKS...IF YOU SEE THIS MESSAGE,
*                            YOU'RE PROBABLY IN THE WRONG PLACE
*
*
***************************************************************************************************************************************************
-->{{#css:Suppresslinks.css}}<css>{{:Suppresslinks.css}}</css>
<noinclude>{{TabsTop}}
<noinclude>{{TabsTop}}
{{Tab|Quickview|phoA}}{{Tab|Gene|phoA}}{{Tab|Gene Product(s)|phoA}}{{Tab|Expression|phoA}}{{Tab On|Evolution|phoA}}{{Tab|On One Page|phoA}}{{TabsBottom}}
{{Tab|Quickview|phoA}}{{Tab|Gene|phoA}}{{Tab|Gene Product(s)|phoA}}{{Tab|Expression|phoA}}{{Tab On|Evolution|phoA}}{{Tab|On One Page|phoA}}{{TabsBottom}}
Line 12: Line 21:
</noinclude>
</noinclude>
==Homologs in Other Organisms==
==Homologs in Other Organisms==
<!--box uid=421aa90e079fa326b6494f812ad13e79..C46a06c58db86f-->
{{BacktoTop}}
<!--box uid=421aa90e079fa326b6494f812ad13e79.44743.L46ab9fdeb1fd9-->
<!--*** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ***  -->
<!--*** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ***  -->
{|class = 'sortable' {{Prettytable}} id='86896'  
{|class = 'sortable' {{Prettytable}} id='207567'  
|- {{table heading style}}
|- {{table heading style}}
!Organism!!Homologs (Statistics)!!Comments
!Organism!!Homologs (Statistics)!!Comments
Line 240: Line 250:
From SHIGELLACYC  
From SHIGELLACYC  
|-class='sortbottom'
|-class='sortbottom'
|[{{SERVER}}/colipedia/index.php/Special:TableEdit?id=421aa90e079fa326b6494f812ad13e79..C46a06c58db86f&page=&pagename={{FULLPAGENAMEE}} edit table] || ||
|[{{SERVER}}/colipedia/index.php/Special:TableEdit?id=421aa90e079fa326b6494f812ad13e79.44743.L46ab9fdeb1fd9&page=44743&pagename={{FULLPAGENAMEE}} edit table] || ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79..C46a06c58db86f-->
<!--box uid=421aa90e079fa326b6494f812ad13e79.44743.L46ab9fdeb1fd9-->
{{Evolution_homologs_table_help}}
{{Evolution_homologs_table_help}}


Line 256: Line 266:


==Families==
==Families==
<!--box uid=421aa90e079fa326b6494f812ad13e79..E46a06c658cafc-->
{{BacktoTop}}
<!--box uid=421aa90e079fa326b6494f812ad13e79.44743.P46aba000a4ed5-->
<!--*** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ***  -->
<!--*** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ***  -->
{|class = 'sortable' {{Prettytable}} id='86897'  
{|class = 'sortable' {{Prettytable}} id='207568'  
|- {{table_heading_style}}
|- {{table_heading_style}}
!Database!!Accession!!Notes
!Database!!Accession!!Notes
Line 269: Line 280:
   
   
|-class='sortbottom'
|-class='sortbottom'
|[{{SERVER}}/colipedia/index.php/Special:TableEdit?id=421aa90e079fa326b6494f812ad13e79..E46a06c658cafc&page=&pagename={{FULLPAGENAMEE}} edit table] || ||
|[{{SERVER}}/colipedia/index.php/Special:TableEdit?id=421aa90e079fa326b6494f812ad13e79.44743.P46aba000a4ed5&page=44743&pagename={{FULLPAGENAMEE}} edit table] || ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79..E46a06c658cafc-->
<!--box uid=421aa90e079fa326b6494f812ad13e79.44743.P46aba000a4ed5-->
{{Evolution_families_table_help}}
{{Evolution_families_table_help}}
<protect><!--Families_notes--></protect>
<protect><!--Families_notes--></protect>
Line 278: Line 289:


==Links==
==Links==
{{Evolution_links_default}}
{{BacktoTop}}
<!--box uid=421aa90e079fa326b6494f812ad13e79.44743.R46a7ef2dd186c-->
<!--*** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ***  -->
{|class = 'sortable' {{Prettytable}} id='108509'
|- {{table_heading_style}}
!Name!!URL!!Comments
|-class='sortbottom'
|[{{SERVER}}/colipedia/index.php/Special:TableEdit?id=421aa90e079fa326b6494f812ad13e79.44743.R46a7ef2dd186c&page=44743&pagename={{FULLPAGENAMEE}} edit table] || ||
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79.44743.R46a7ef2dd186c-->
{{Links_help}}
 
==References==
==References==
{{BacktoTop}}
{{RefHelp}}
{{RefHelp}}
<references/>
<references/>

Revision as of 19:58, 28 July 2007

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

[back to top]


Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000012212 (score: 1.000; bootstrap: 100%)
  • ENSANGP00000016054 (score: 0.421)
  • ENSANGP00000029133 (score: 0.379)
  • ENSANGP00000004005 (score: 0.332)
  • ENSANGP00000002165 (score: 0.332)
  • ENSANGP00000015627 (score: 0.318)
  • ENSANGP00000016308 (score: 0.222)
  • ENSANGP00000020398 (score: 0.220)
  • ENSANGP00000029400 (score: 0.198)
  • ENSANGP00000015648 (score: 0.105)
  • ENSANGP00000028729 (score: 0.071)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000033694 (score: 1.000; bootstrap: 100%)
  • ENSAPMP00000008363 (score: 0.137)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000011783 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000005937 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000022269 (score: 0.428)
  • ENSBTAP00000038294 (score: 0.353)
  • ENSBTAP00000016406 (score: 0.340)
  • ENSBTAP00000016392 (score: 0.309)
  • ENSBTAP00000022731 (score: 0.066)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000016470 (score: 1.000; bootstrap: 100%)
  • ENSCAFP00000021891 (score: 0.538)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000013633 (score: 1.000; bootstrap: 100%)
  • ENSCINP00000016851 (score: 0.380)
  • ENSCINP00000012509 (score: 0.377)
  • ENSCINP00000000365 (score: 0.376)
  • ENSCINP00000014537 (score: 0.330)
  • ENSCINP00000014541 (score: 0.155)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-050327-78 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-050327-78 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-050626-55 (score: 0.498)
  • ZDB-GENE-050626-142 (score: 0.498)
  • ZDB-CDNA-040425-2039 (score: 0.251)
  • ZDB-GENE-040420-1 (score: 0.251)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0231570 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0033423 (score: 1.000; bootstrap: 100%)
  • FBgn0035619 (score: 0.484)
  • FBgn0043791 (score: 0.354)
  • FBgn0037083 (score: 0.317)
  • FBgn0038845 (score: 0.313)
  • FBgn0035620 (score: 0.291)
  • FBgn0034712 (score: 0.234)
  • FBgn0034711 (score: 0.229)
  • FBgn0034710 (score: 0.215)
  • FBgn0032779 (score: 0.198)
  • FBgn0016123 (score: 0.187)
  • FBgn0030661 (score: 0.153)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA10582-PA (score: 1.000; bootstrap: 100%)
  • GA18693-PA (score: 0.489)
  • GA10422-PA (score: 0.325)
  • GA14786-PA (score: 0.318)
  • GA20850-PA (score: 0.286)
  • GA17037-PA (score: 0.254)
  • GA17199-PA (score: 0.233)
  • GA13119-PA (score: 0.204)
  • GA20828-PA (score: 0.169)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000012662 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000295450 (score: 1.000; bootstrap: 100%)
  • ENSP00000295453 (score: 0.947)
  • ENSP00000295463 (score: 0.831)
  • ENSP00000343937 (score: 0.434)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000009167 (score: 1.000; bootstrap: 100%)
  • ENSMMUP00000022178 (score: 0.798)
  • ENSMMUP00000002960 (score: 0.446)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000003150 (score: 1.000; bootstrap: 100%)
  • ENSMODP00000019976 (score: 0.455)

From Inparanoid:20070104

Mus musculus

  • MGI:108009 (score: 1.000; bootstrap: 100%)
  • MGI:1924018 (score: 0.732)
  • MGI:87984 (score: 0.685)
  • MGI:87983 (score: 0.461)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000022289 (score: 1.000; bootstrap: 100%)
  • ENSPTRP00000022290 (score: 0.850)
  • ENSPTRP00000000520 (score: 0.368)
  • ENSPTRP00000022287 (score: 0.273)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000026095 (score: 1.000; bootstrap: 100%)
  • ENSRNOP00000026190 (score: 0.708)
  • ENSRNOP00000026294 (score: 0.707)
  • ENSRNOP00000038169 (score: 0.654)
  • ENSRNOP00000019004 (score: 0.460)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YDR481C (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPBC14F53c (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000157676 (score: 1.000; bootstrap: 100%)
  • NEWSINFRUP00000141310 (score: 0.110)
  • NEWSINFRUP00000137169 (score: 0.102)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00026721001 (score: 1.000; bootstrap: 100%)
  • GSTENP00022940001 (score: 0.507)
  • GSTENP00022912001 (score: 0.493)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000050243 (score: 1.000; bootstrap: 100%)
  • ENSXETP00000049272 (score: 0.468)

From Inparanoid:20070104

Shigella flexneri

PHOA

From SHIGELLACYC

edit table

See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Do-It-Yourself Web Tools


Notes

Families

[back to top]


Database Accession Notes

PFAM (EcoliWiki Page)

PFAM:PF00245

edit table

See Help:Evolution_families for help entering or editing information in this section of EcoliWiki.

Notes

Links

[back to top]


Name URL Comments
edit table

See Help:Links_table for how to enter or edit information in this section of EcoliWiki.

References

[back to top]


See Help:References for how to manage references in EcoliWiki.

Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=phoA:Evolution&oldid=192680"