metB:Gene Product(s): Difference between revisions

Standard name	MetB product
Synonyms	cystathionine gamma-synthase, PLP-dependent product^[1], B3939 product^[2]^[1], MetB product^[2]^[1]
Product description	MetB^[2]^[3]; Component of ; O-SUCCHOMOSERLYASE-CPLX^[2]
EC number (for enzymes)	2.5.1.48^[1]
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Notes

Function

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Gene Ontology

Qualifier	GO ID	GO term name	Aspect	Notes	Status
	GO:0005737	cytoplasm	C	Seeded from EcoCyc 11.1^[3].	required fields missing
	GO:0009063	amino acid catabolic process	P	Seeded from EcoCyc 11.1^[3].	required fields missing
	GO:0009086	methionine biosynthetic process	P	Seeded from EcoCyc 11.1^[3].	required fields missing
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Interactions

Partner Type	Partner	Notes
Protein	Subunits of O-SUCCHOMOSERLYASE-CPLX	could be indirect
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Notes

Localization

Compartment	Description	Evidence	Notes
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Notes

Structure and Physical Properties

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Physical Properties

Sequence	at EcoCyc MTRKQATIAV RSGLNDDEQY GCVVPPIHLS STYNFTGFNE PRAHDYSRRG NPTRDVVQRA LAELEGGAGA VLTNTGMSAI HLVTTVFLKP GDLLVAPHDC YGGSYRLFDS LAKRGCYRVL FVDQGDEQAL RAALAEKPKL VLVESPSNPL LRVVDIAKIC HLAREVGAVS VVDNTFLSPA LQNPLALGAD LVLHSCTKYL NGHSDVVAGV VIAKDPDVVT ELAWWANNIG VTGGAFDSYL LLRGLRTLVP RMELAQRNAQ AIVKYLQTQP LVKKLYHPSL PENQGHEIAA RQQKGFGAML SFELDGDEQT LRRFLGGLSL FTLAESLGGV ESLISHAATM THAGMAPEAR AAAGISETLL RISTGIEDGE DLIADLENGF RAANKG
Mol. Wt	41.55 kDa (calc) ^[2]
pI	6.43^[2]
Extinction coefficient	25900 - 26525 (calc based on 10 Y, 2 W, and 5 C residues)
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See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Domains/Motifs/Modification Sites

Type	Residues	Description	Notes
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Structure

Structure Type	Organism	Accession	Residues covered	Notes
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Notes

Gene Product Resources

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Resource type	Source	Notes/Reference
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Notes

Accessions in Other Databases

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Database	Accession	Notes
EcoCyc (EcoliWiki Page)	EcoCyc:O-SUCCHOMOSERLYASE-MONOMER
UniProt (EcoliWiki Page)	UniProt:P00935
PFAM (EcoliWiki Page)	PFAM:PF01053
RefSeq (EcoliWiki Page)	RefSeq:NP_418374
ModBase (EcoliWiki Page)	ModBase:P00935
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Notes

Links

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Name	URL	Comments
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References

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↑ ^1.0 ^1.1 ^1.2 ^1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
↑ ^2.0 ^2.1 ^2.2 ^2.3 ^2.4 ^2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
↑ ^3.0 ^3.1 ^3.2 ^3.3 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7

[LIB:Riley_2006-1] 1.0 ^1.1 ^1.2 ^1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)

[LIB:EcoCyc10.6-2] 2.0 ^2.1 ^2.2 ^2.3 ^2.4 ^2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7

[LIB:EcoCyc11.1-3] 3.0 ^3.1 ^3.2 ^3.3 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7

[1]

[2]

[3]

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@@ Line 16: / Line 25: @@
 |{{Sub}}[[Talk:{{PAGENAMEE}}| Suggestions]]
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 ==Nomenclature==
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 !{{table heading style}} |Synonyms
 |
-cystathionine gamma-synthase, PLP-dependent<ref name='LIB:Riley_2006'/>, B3939<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MetB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>
+cystathionine gamma-synthase, PLP-dependent product<ref name='LIB:Riley_2006'/>, B3939 product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MetB product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>
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 !{{table heading style}} |Product description
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-MetB<ref name='LIB:EcoCyc10.6'/>; MetB<ref name='LIB:EcoCyc11.1'/>; Component of [[:Category:Complex:O-SUCCHOMOSERLYASE-CPLX|O-SUCCHOMOSERLYASE-CPLX]]<ref name='LIB:EcoCyc10.6'/>
+MetB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;
+Component of ; [[:Category:Complex:O-SUCCHOMOSERLYASE-CPLX|O-SUCCHOMOSERLYASE-CPLX]]<ref name='LIB:EcoCyc10.6'/>
 |-
 !{{table heading style}} |EC number (for enzymes)
 |
-*[http://www.brenda.uni-koeln.de/php/result_flat.php4?ecno=2.5.1.48 2.5.1.48]<ref name='LIB:Riley_2006'/>
+** [http://www.brenda.uni-koeln.de/php/result_flat.php4?ecno=2.5.1.48 2.5.1.48]<ref name='LIB:Riley_2006'/>
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 ==Function==
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 required fields missing
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 {{Product_GO_help}}
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 <!--Function_notes--></protect>
 ===Notes===
 ==Localization==
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 ===Notes===
 ==Structure and Physical Properties==
+{{BacktoTop}}
 <protect>
-===Physical Properties===
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 - 26525 (calc based on 10 Y, 2 W, and 5 C residues)
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 {{Product_domains_motifs_help}}
-===Structure===
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 ==Gene Product Resources==
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 <!--*** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ***  -->
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 ===Notes===
 ==Accessions in Other Databases==
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 ==Links==
+{{BacktoTop}}
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-<noinclude>
 ==References==
+{{BacktoTop}}
 {{RefHelp}}
 <references/>
 __NOTOC__
-[[Category:GO:0005737]][[Category:GO:0009063]][[Category:GO:0009086]][[Category:Complex:O-SUCCHOMOSERLYASE-CPLX]]</noinclude>
+</noinclude>

metB:Gene Product(s): Difference between revisions

Revision as of 20:37, 28 July 2007

Nomenclature

Notes

Function

Notes

Localization

Notes

Structure and Physical Properties

Notes

Gene Product Resources

Notes

Accessions in Other Databases

Notes

Links

References

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