parE:Quickview: Difference between revisions

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*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
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{|  id="K49aeef33a0c0a"  class=" tableEdit New_Quickview_Table"   
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK3021, b3030, JW2998, nfxD''<ref name='LIB:Riley_2006'/>
''ECK3021, b3030, JW2998, nfxD''<ref name='LIB:Riley_2006'/>, nfxD''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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DNA topoisomerase IV, subunit B<ref name='LIB:Riley_2006'/>, B3030<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, NfxD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ParE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''DNA topoisomerase IV, subunit B<ref name='LIB:Riley_2006'/>, B3030<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, NfxD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ParE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK3021, JW2998, nfxD, b3030''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://porteco.org/AjaxSearch.jsp?searchString=parE&s=search PortEco search(parE)]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_dna.php?gene=parE&loc=MG1655:3173418..3171526,W3110:3174052..3172160,REL606:3109568..3107676,DH10B:3271163..3269271,BW2952:3058674..3060566 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3058674&end=3060566&gene=parE&aa= Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=parE+AND+escherichia+coli Pubmed(parE)]&nbsp;&nbsp;&nbsp; [http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=parE Textpresso(parE)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=parE&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10687]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000680&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=parE&loc=MG1655%3A3173418..3171526,W3110%3A3174052..3172160,REL606%3A3109568..3107676,DH10B%3A3271163..3269271,BW2952%3A3058674..3060566]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3058674&end=3060566&gene=parE&aa=mtqtynadaievltglepvrrrpgmytdttrpnhlgqevidnsvdealaghakrvdvilhadqsleviddgrgmpvdihpeegvpavelilcrlhaggkfsnknyqfsgglhgvgisvvnalskrvevnvrrdgqvyniafengekvqdlqvvgtcgkrntgtsvhfwpdetffdsprfsvsrlthvlkakavlcpgveitfkdeinnteqrwcyqdglndylaeavnglptlpekpfignfagdteavdwallwlpeggelltesyvnliptmqggthvnglrqglldamrefceyrnilprgvklsaediwdrcayvlsvkmqdpqfagqtkerlssrqcaafvsgvvkdafilwlnqnvqaaellaemaissaqrrmraakkvvrkkltsgpalpgkladctaqdlnrtelflvegdsaggsakqardreyqaimplkgkilntwevssdevlasqevhdisvaigidpdsddlsqlrygkiciladadsdglhiatllcalfvkhfralvkhghvyvalpplyridlgkevyyalteeekegvleqlkrkkgkpnvqrfkglgemnpmqlrettldpntrrlvqltiddeddqrtdammdmllakkrsedrrnwlqekgdmaeiev]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=parE+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=parE]]&nbsp;&nbsp;


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Latest revision as of 21:56, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

parE

Gene Synonym(s)

ECK3021, b3030, JW2998, nfxD[1], nfxD

Product Desc.

topoisomerase IV subunit B[2][3];

Component of topoisomerase IV[3]

Topoisomerase IV, subunit B, ATP-dependent, type II; chromosome decatenase; relaxes positive supercoils much faster than negative supercoils; DNA unknotting activity; heterotetrameric[4]

Product Synonyms(s)

DNA topoisomerase IV, subunit B[1], B3030[2][1], NfxD[2][1], ParE[2][1] , ECK3021, JW2998, nfxD, b3030

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): parE[2]

Regulation/Activity
Quick Links



        

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

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Topo IV is stimulated by SeqA.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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