gatR:Quickview: Difference between revisions

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*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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Note that this is a pseudogene in K12 strains.
''Note that this is a pseudogene in K12 strains., ECK2083, JW2074, JW5340, b4498''
 
''gatR, ECK2083, b2087, JW5340, b2090, JW2074, b4498, JW5340+JW2074, gatR_1'', gatR_2<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc11.1'/><ref name='LIB:EcoCyc10.6'/>
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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B2087<ref name='LIB:EcoCyc10.6'/>, GatR_1<ref name='LIB:EcoCyc10.6'/>, GatR<ref name='LIB:EcoCyc10.6'/>, split galactitol utilization operon repressor, fragment 1<ref name='LIB:EcoCyc10.6'/>, B2090<ref name='LIB:EcoCyc10.6'/>, split galactitol utilization operon repressor, fragment 2<ref name='LIB:EcoCyc10.6'/>  
''B2087<ref name='LIB:EcoCyc10.6'/>, GatR_1<ref name='LIB:EcoCyc10.6'/>, GatR<ref name='LIB:EcoCyc10.6'/>, split galactitol utilization operon repressor, fragment 1<ref name='LIB:EcoCyc10.6'/>, B2090<ref name='LIB:EcoCyc10.6'/>, split galactitol utilization operon repressor, fragment 2<ref name='LIB:EcoCyc10.6'/> , ECK2083, JW2074, JW5340, b4498''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://porteco.org/AjaxSearch.jsp?searchString=2&s=search PortEco search(2)]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_dna.php?gene=2&loc=MG1655:2168163..2167717,W3110:2172276..2171830,MG1655:2169757..2169419,W3110:2173870..2173532,MG1655:2169757..2167717,W3110:2173870..2171830 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2173870&end=2171830&gene=2&aa= Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=2+AND+gatR Pubmed(2)]&nbsp;&nbsp;&nbsp; [http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=2 Textpresso(2)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=2&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG12162]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120002058&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=2&loc=MG1655%3A2168163..2167717,W3110%3A2172276..2171830,MG1655%3A2169757..2169419,W3110%3A2173870..2173532,MG1655%3A2169757..2167717,W3110%3A2173870..2171830]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2173870&end=2171830&gene=2&aa=mnsferrnkiiqlvneqgtvlvqdlagvfaaseatiradlrfleqkgvvtrfhggaakimsgnsetetqevgfkerfqlasapknriaqaavkmihegmtvildsgsttmliaeglmtaknitvitnslpaafalsenkditlvvcggtvrhktrsmhgsiaerslqdinadlmfvgadgidavngittfnegysisgamvtaankviavldsskfnrrgfnqvlpiekidiiitddavsevdklalqktrvklitv]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=2+AND+gatR]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=2]]&nbsp;&nbsp;


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Latest revision as of 21:56, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

gatR

Gene Synonym(s)

Note that this is a pseudogene in K12 strains., ECK2083, JW2074, JW5340, b4498

Product Desc.

Note that this is a pseudogene in K12 strains.

negative DNA-binding transcriptional regulator of galactitol metabolism[1][2]; GatR_2[1][2];

Component of GatR transcriptional repressor[1][2]

Product Synonyms(s)

B2087[1], GatR_1[1], GatR[1], split galactitol utilization operon repressor, fragment 1[1], B2090[1], split galactitol utilization operon repressor, fragment 2[1] , ECK2083, JW2074, JW5340, b4498

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): gatR_1[1]

Regulation/Activity
Quick Links



        

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

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This is a pseudogene in K12 strains.



References

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  1. ↑ 1.00 1.01 1.02 1.03 1.04 1.05 1.06 1.07 1.08 1.09 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  2. ↑ 2.0 2.1 2.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
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